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Arabidopsis thaliana

Assembly Name:TAIR10

Gene File:Araport11_genes.201606.pep.fasta.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
AT2G43900.2
PEP
AT2G43900.2
Position on the Genome Chromosome Chr2
Start Position 18178801
End Position 18183823
Strand -
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI03141949
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
Endonuclease/exonuclease/phosphatase
Gene ID
Ortholog group unique ID
Functional annotation Source DB
trembl
Protein name
5PTase12
Accession
CrossRef Refseq from UniProt
NA
EC
NA
KEGG entry
NA
KO ID
NA
Pfam ID
NA
Pfam Description
InterPro ID
IPR000535,IPR000300,IPR036322,IPR001680,IPR036691,IPR015943
InterPro Description Details
GO ID
GO:0046856
GO Description Details
GOslim ID
GO:0006793,GO:0044255
GO slim Description Details
Transcription Factor (TF) family 
NA
TF family Description
NA
Best hit taxonomy Species Arabidopsis thaliana
Family Brassicaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments
gene , 遺伝子 , ecotype Col-0 , Brassicaceae , アブラナ科 , Arabidopsis , シロイヌナズナ属 , Thale cress , シロイヌナズナ Thale cress , シロイヌナズナ

Annotation Details

ID
Group/Domain
Name
Link
Source Annotation(1 item)
OrthoDB(1 item)
96280at33090
Endonuclease/exonuclease/phosphatase
InterPro(6 items)
 
Major sperm protein (MSP) domain
 
WD40_repeat_dom_sf
 
Endo/exonu/phosph_ase_sf
 
WD40/YVTN_repeat-like_dom_sf
Gene ontology(1 item)
BP
phosphatidylinositol dephosphorylation
GO slim(2 items)
BP
phosphorus metabolic process
BP
cellular lipid metabolic process

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.