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Arabidopsis thaliana

Assembly Name:TAIR10

Gene File:Araport11_genes.201606.pep.fasta.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
AT2G43640.1
PEP
AT2G43640.1
Position on the Genome Chromosome Chr2
Start Position 18097614
End Position 18098619
Strand -
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI00143253
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
Signal recognition particle, SRP14 subunit
Gene ID
Ortholog group unique ID
Functional annotation Source DB
swissprot
Protein name
Signal recognition particle 14 kDa protein
Accession
CrossRef Refseq from UniProt
EC
NA
KEGG entry
KO ID
NA
Pfam ID
PF02290
Pfam Description Details
InterPro ID
IPR009018,IPR003210
InterPro Description Details
GO ID
GO:0005829,GO:0008312,GO:0030942,GO:0006614,GO:0045047,GO:0005786
GO Description Details
GOslim ID
GO:0015031,GO:0042277,GO:0003676,GO:0051641,GO:0005575,GO:0048500,GO:0005737
GO slim Description Details
Transcription Factor (TF) family 
NA
TF family Description
NA
Best hit taxonomy Species Arabidopsis thaliana
Family Brassicaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments ath:AT2G43640
gene , 遺伝子 , ecotype Col-0 , Brassicaceae , アブラナ科 , Arabidopsis , シロイヌナズナ属 , Thale cress , シロイヌナズナ Thale cress , シロイヌナズナ

Annotation Details

ID
Group/Domain
Name
Link
Source Annotation(1 item)
 
Signal recognition particle 14 kDa protein
OrthoDB(1 item)
236532at33090
Signal recognition particle, SRP14 subunit
Pfam(1 item)
 
Signal recognition particle 14kD protein
InterPro(2 items)
 
Signal_recog_particle_SRP9/14
 
Signal recognition particle, SRP14 subunit
Gene ontology(6 items)
MF
7S RNA binding
MF
endoplasmic reticulum signal peptide binding
BP
SRP-dependent cotranslational protein targeting to membrane
BP
protein targeting to ER
CC
signal recognition particle, endoplasmic reticulum targeting
GO slim(7 items)
BP
protein transport
MF
peptide binding
MF
nucleic acid binding
BP
cellular localization
CC
cellular_component
CC
signal recognition particle

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.