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Arabidopsis thaliana

Assembly Name:TAIR10

Gene File:Araport11_genes.201606.pep.fasta.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
AT2G43290.1
PEP
AT2G43290.1
Position on the Genome Chromosome Chr2
Start Position 17991308
End Position 17991955
Strand -
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI00647372
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
EF-hand domain
Gene ID
Ortholog group unique ID
Functional annotation Source DB
swissprot
Protein name
Calmodulin-like protein 5
Accession
CrossRef Refseq from UniProt
EC
NA
KEGG entry
KO ID
NA
Pfam ID
PF13499
Pfam Description Details
InterPro ID
IPR011992,IPR002048,IPR039647,IPR018247
InterPro Description Details
GO ID
GO:0012505,GO:0005509,GO:0031303
GO Description Details
GOslim ID
GO:0043167,GO:0016020,GO:0005768,GO:0005773
GO slim Description Details
Transcription Factor (TF) family 
NA
TF family Description
NA
Best hit taxonomy Species Arabidopsis thaliana
Family Brassicaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments ath:AT2G43290
gene , 遺伝子 , ecotype Col-0 , Brassicaceae , アブラナ科 , Arabidopsis , シロイヌナズナ属 , Thale cress , シロイヌナズナ Thale cress , シロイヌナズナ

Annotation Details

ID
Group/Domain
Name
Link
Source Annotation(1 item)
 
Calmodulin-like protein 5
OrthoDB(1 item)
203082at33090
EF-hand domain
Pfam(1 item)
 
EF-hand domain pair
InterPro(4 items)
 
EF-hand-dom_pair
 
EF-hand domain
 
EF_hand_pair_protein_CML-like
 
EF_Hand_1_Ca_BS
Gene ontology(3 items)
CC
endomembrane system
MF
calcium ion binding
CC
integral component of endosome membrane
GO slim(4 items)

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.