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Arabidopsis thaliana

Assembly Name:TAIR10

Gene File:Araport11_genes.201606.pep.fasta.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
AT2G42070.1
PEP
AT2G42070.1
Position on the Genome Chromosome Chr2
Start Position 17549669
End Position 17551066
Strand -
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI00395681
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
NUDIX hydrolase domain
Gene ID
Ortholog group unique ID
Functional annotation Source DB
swissprot
Protein name
Nudix hydrolase 23, chloroplastic
Accession
CrossRef Refseq from UniProt
EC
KEGG entry
KO ID
NA
Pfam ID
PF00293,PF14803
Pfam Description Details
InterPro ID
IPR029401,IPR020476,IPR000086,IPR015797,IPR020084
InterPro Description Details
GO ID
GO:0009507,GO:0009416,GO:0046872,GO:0042726,GO:0047884,GO:0047631
GO Description Details
GOslim ID
GO:0016787,GO:0043167,GO:0006807,GO:0046483,GO:0050896,GO:0009536
GO slim Description Details
Transcription Factor (TF) family 
NA
TF family Description
NA
Best hit taxonomy Species Arabidopsis thaliana
Family Brassicaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments ath:AT2G42070
gene , 遺伝子 , ecotype Col-0 , Brassicaceae , アブラナ科 , Arabidopsis , シロイヌナズナ属 , Thale cress , シロイヌナズナ Thale cress , シロイヌナズナ

Annotation Details

ID
Group/Domain
Name
Link
Source Annotation(2 items)
 
Nudix hydrolase 23, chloroplastic
OrthoDB(1 item)
193515at33090
NUDIX hydrolase domain
Pfam(2 items)
 
NUDIX domain
 
Nudix N-terminal
InterPro(5 items)
 
Nudix hydrolase, N-terminal
 
Nudix_hydrolase
 
NUDIX hydrolase domain
 
NUDIX_hydrolase-like_dom_sf
 
NUDIX_hydrolase_CS
Gene ontology(6 items)
BP
response to light stimulus
MF
metal ion binding
BP
flavin-containing compound metabolic process
MF
FAD diphosphatase activity
MF
ADP-ribose diphosphatase activity
GO slim(6 items)
MF
hydrolase activity
BP
nitrogen compound metabolic process
BP
heterocycle metabolic process
BP
response to stimulus

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.