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Arabidopsis thaliana

Assembly Name:TAIR10

Gene File:Araport11_genes.201606.pep.fasta.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
AT2G38530.1
PEP
AT2G38530.1
Position on the Genome Chromosome Chr2
Start Position 16128481
End Position 16128948
Strand +
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI00417326
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
Non-specific lipid-transfer protein
Gene ID
Ortholog group unique ID
Functional annotation Source DB
swissprot
Protein name
Non-specific lipid-transfer protein 2
Accession
CrossRef Refseq from UniProt
EC
NA
KEGG entry
NA
KO ID
NA
Pfam ID
PF00234
Pfam Description Details
InterPro ID
IPR036312,IPR000528,IPR016140
InterPro Description Details
GO ID
GO:0005768,GO:0005794,GO:0005802,GO:0042335,GO:0005886,GO:0009414,GO:0008289,GO:1901957,GO:0006649,GO:0090627,GO:0009507,GO:0016020,GO:0009505
GO Description Details
GOslim ID
GO:0005768,GO:0032502,GO:0006811,GO:0016020,GO:0050896,GO:0008289,GO:0006869,GO:0005618,GO:0032501,GO:0005794,GO:0009059,GO:0009536,GO:0061024,GO:0050789
GO slim Description Details
Transcription Factor (TF) family 
NA
TF family Description
NA
Best hit taxonomy Species Arabidopsis thaliana
Family Brassicaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments
gene , 遺伝子 , ecotype Col-0 , Brassicaceae , アブラナ科 , Arabidopsis , シロイヌナズナ属 , Thale cress , シロイヌナズナ Thale cress , シロイヌナズナ

Annotation Details

ID
Group/Domain
Name
Link
Source Annotation(1 item)
 
Non-specific lipid-transfer protein 2
OrthoDB(1 item)
222633at33090
Non-specific lipid-transfer protein
Pfam(1 item)
 
Protease inhibitor/seed storage/LTP family
InterPro(3 items)
 
Bifun_inhib/LTP/seed_sf
 
Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain
Gene ontology(13 items)
CC
Golgi apparatus
CC
trans-Golgi network
BP
cuticle development
CC
plasma membrane
BP
response to water deprivation
MF
lipid binding
BP
regulation of cutin biosynthetic process
BP
phospholipid transfer to membrane
BP
plant epidermal cell differentiation
CC
plant-type cell wall
GO slim(14 items)
BP
developmental process
BP
ion transport
BP
response to stimulus
MF
lipid binding
BP
lipid transport
BP
multicellular organismal process
CC
Golgi apparatus
BP
macromolecule biosynthetic process
BP
membrane organization
BP
regulation of biological process

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.