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Arabidopsis thaliana

Assembly Name:TAIR10

Gene File:Araport11_genes.201606.pep.fasta.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
AT2G38290.1
PEP
AT2G38290.1
Position on the Genome Chromosome Chr2
Start Position 16039672
End Position 16042291
Strand -
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI00150120
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
Ammonium transporter
Gene ID
Ortholog group unique ID
Functional annotation Source DB
trembl
Protein name
Ammonium transporter
Accession
CrossRef Refseq from UniProt
NA
EC
NA
KEGG entry
NA
KO ID
NA
Pfam ID
PF00909
Pfam Description Details
InterPro ID
IPR018047,IPR002229,IPR001905,IPR029020,IPR024041
InterPro Description Details
GO ID
GO:0005887,GO:0008519
GO Description Details
GOslim ID
GO:0006811,GO:0005215,GO:0016020
GO slim Description Details
Transcription Factor (TF) family 
NA
TF family Description
NA
Best hit taxonomy Species Arabidopsis thaliana
Family Brassicaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments
gene , 遺伝子 , ecotype Col-0 , Brassicaceae , アブラナ科 , Arabidopsis , シロイヌナズナ属 , Thale cress , シロイヌナズナ Thale cress , シロイヌナズナ

Annotation Details

ID
Group/Domain
Name
Link
Source Annotation(1 item)
 
Ammonium transporter
OrthoDB(1 item)
88137at33090
Ammonium transporter
Pfam(1 item)
 
Ammonium Transporter Family
InterPro(5 items)
 
Ammonium_transpt_CS
 
Ammonium_transpt
 
Ammonium/urea_transptr
 
Ammonium transporter AmtB-like domain
Gene ontology(2 items)
CC
integral component of plasma membrane
MF
ammonium transmembrane transporter activity
GO slim(3 items)
BP
ion transport
MF
transporter activity

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.