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Arabidopsis thaliana

Assembly Name:TAIR10

Gene File:Araport11_genes.201606.pep.fasta.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
AT2G36010.2
PEP
AT2G36010.2
Position on the Genome Chromosome Chr2
Start Position 15119688
End Position 15122893
Strand +
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI01184428
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
Winged helix-like DNA-binding domain superfamily
Gene ID
Ortholog group unique ID
Functional annotation Source DB
trembl
Protein name
E2F transcription factor 3
Accession
CrossRef Refseq from UniProt
EC
NA
KEGG entry
NA
KO ID
NA
Pfam ID
PF02319,PF16421
Pfam Description Details
InterPro ID
IPR015633,IPR032198,IPR036388,IPR037241,IPR003316,IPR036390
InterPro Description Details
GO ID
GO:0003677,GO:0005634,GO:0003700,GO:0005667,GO:0046983
GO Description Details
GOslim ID
GO:0050789,GO:0006351,GO:0003676,GO:0005515,GO:0005667,GO:0005634,GO:0065009
GO slim Description Details
Transcription Factor (TF) family 
TF family Description
E2F/DP family protein
Best hit taxonomy Species Arabidopsis thaliana
Family Brassicaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments
gene , 遺伝子 , ecotype Col-0 , Brassicaceae , アブラナ科 , Arabidopsis , シロイヌナズナ属 , Thale cress , シロイヌナズナ Thale cress , シロイヌナズナ

Annotation Details

ID
Group/Domain
Name
Link
Source Annotation(1 item)
 
E2F transcription factor 3
OrthoDB(1 item)
100842at33090
Winged helix-like DNA-binding domain superfamily
Pfam(2 items)
 
E2F/DP family winged-helix DNA-binding domain
 
E2F transcription factor CC-MB domain
InterPro(6 items)
 
E2F transcription factor, CC-MB domain
 
WH-like_DNA-bd_sf
 
E2F-DP_heterodim
 
E2F/DP family, winged-helix DNA-binding domain
Gene ontology(5 items)
MF
DNA-binding transcription factor activity
CC
transcription regulator complex
MF
protein dimerization activity
GO slim(7 items)
BP
regulation of biological process
BP
transcription, DNA-templated
MF
nucleic acid binding
MF
protein binding
CC
transcription regulator complex
BP
regulation of molecular function

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.