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Arabidopsis thaliana

Assembly Name:TAIR10

Gene File:Araport11_genes.201606.pep.fasta.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
AT2G35190.1
PEP
AT2G35190.1
Position on the Genome Chromosome Chr2
Start Position 14831087
End Position 14832979
Strand +
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI00557222
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
Sec20
Gene ID
Ortholog group unique ID
Functional annotation Source DB
swissprot
Protein name
Novel plant SNARE 11
Accession
CrossRef Refseq from UniProt
EC
NA
KEGG entry
KO ID
NA
Pfam ID
PF03908
Pfam Description Details
InterPro ID
IPR005606,IPR000727
InterPro Description Details
GO ID
GO:0005783,GO:0005829,GO:0006890,GO:0048280,GO:0005789,GO:0006623,GO:0009504,GO:0006896,GO:0000149,GO:0016021,GO:0006891,GO:0006888,GO:0031902,GO:0042147,GO:0005484,GO:0031201,GO:0005794,GO:0000911,GO:0005886,GO:0012507
GO Description Details
GOslim ID
GO:0005515,GO:0032991,GO:0048284,GO:0016192,GO:0060090,GO:0005575,GO:0005783,GO:0051641,GO:0007049,GO:0005737,GO:0031982,GO:0016020,GO:0005768,GO:0061024,GO:0005773,GO:0005794,GO:0016050,GO:0015031,GO:0051301
GO slim Description Details
Transcription Factor (TF) family 
NA
TF family Description
NA
Best hit taxonomy Species Arabidopsis thaliana
Family Brassicaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments ath:AT2G35190
gene , 遺伝子 , ecotype Col-0 , Brassicaceae , アブラナ科 , Arabidopsis , シロイヌナズナ属 , Thale cress , シロイヌナズナ Thale cress , シロイヌナズナ

Annotation Details

ID
Group/Domain
Name
Link
Source Annotation(1 item)
 
Novel plant SNARE 11
OrthoDB(1 item)
Pfam(1 item)
InterPro(2 items)
 
Target SNARE coiled-coil homology domain
Gene ontology(20 items)
CC
endoplasmic reticulum
BP
retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum
BP
vesicle fusion with Golgi apparatus
CC
endoplasmic reticulum membrane
BP
protein targeting to vacuole
BP
Golgi to vacuole transport
MF
SNARE binding
CC
integral component of membrane
BP
intra-Golgi vesicle-mediated transport
BP
endoplasmic reticulum to Golgi vesicle-mediated transport
CC
late endosome membrane
BP
retrograde transport, endosome to Golgi
MF
SNAP receptor activity
CC
SNARE complex
CC
Golgi apparatus
BP
cytokinesis by cell plate formation
CC
plasma membrane
CC
ER to Golgi transport vesicle membrane
GO slim(19 items)
MF
protein binding
CC
protein-containing complex
BP
organelle fusion
BP
vesicle-mediated transport
MF
molecular adaptor activity
CC
cellular_component
CC
endoplasmic reticulum
BP
cellular localization
BP
membrane organization
CC
Golgi apparatus
BP
vesicle organization
BP
protein transport
BP
cell division

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.