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Arabidopsis thaliana

Assembly Name:TAIR10

Gene File:Araport11_genes.201606.pep.fasta.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
AT2G32930.2
PEP
AT2G32930.2
Position on the Genome Chromosome Chr2
Start Position 13965990
End Position 13968419
Strand -
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI00305883
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
Zinc finger, CCCH-type
Gene ID
Ortholog group unique ID
Functional annotation Source DB
trembl
Protein name
Uncharacterized protein
Accession
CrossRef Refseq from UniProt
EC
NA
KEGG entry
NA
KO ID
NA
Pfam ID
PF00642
Pfam Description Details
InterPro ID
IPR036855,IPR000571
InterPro Description Details
GO ID
GO:0003677,GO:0046872
GO Description Details
GOslim ID
GO:0043167,GO:0003676
GO slim Description Details
Transcription Factor (TF) family 
TF family Description
C3H family protein
Best hit taxonomy Species Arabidopsis thaliana
Family Brassicaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments
gene , 遺伝子 , ecotype Col-0 , Brassicaceae , アブラナ科 , Arabidopsis , シロイヌナズナ属 , Thale cress , シロイヌナズナ Thale cress , シロイヌナズナ

Annotation Details

ID
Group/Domain
Name
Link
Source Annotation(1 item)
 
Uncharacterized protein
OrthoDB(1 item)
161160at33090
Zinc finger, CCCH-type
Pfam(1 item)
 
Zinc finger C-x8-C-x5-C-x3-H type (and similar)
InterPro(2 items)
 
Zinc finger, CCCH-type
Gene ontology(2 items)
MF
metal ion binding
GO slim(2 items)
MF
nucleic acid binding

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.