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Arabidopsis thaliana

Assembly Name:TAIR10

Gene File:Araport11_genes.201606.pep.fasta.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
AT2G32290.1
PEP
AT2G32290.1
Position on the Genome Chromosome Chr2
Start Position 13714643
End Position 13716906
Strand -
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI00404147
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
Beta-amylase
Gene ID
Ortholog group unique ID
Functional annotation Source DB
trembl
Protein name
Beta-amylase
Accession
CrossRef Refseq from UniProt
NA
EC
KEGG entry
NA
KO ID
NA
Pfam ID
PF01373
Pfam Description Details
InterPro ID
IPR018238,IPR001371,IPR001554,IPR017853
InterPro Description Details
GO ID
GO:0000272,GO:0016161,GO:0102229
GO Description Details
GOslim ID
GO:0005976,GO:0009057,GO:0016787
GO slim Description Details
Transcription Factor (TF) family 
NA
TF family Description
NA
Best hit taxonomy Species Arabidopsis thaliana
Family Brassicaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments
gene , 遺伝子 , ecotype Col-0 , Brassicaceae , アブラナ科 , Arabidopsis , シロイヌナズナ属 , Thale cress , シロイヌナズナ Thale cress , シロイヌナズナ

Annotation Details

ID
Group/Domain
Name
Link
Source Annotation(2 items)
 
Beta-amylase
OrthoDB(1 item)
37807at33090
Beta-amylase
Pfam(1 item)
 
Glycosyl hydrolase family 14
InterPro(4 items)
 
Glyco_hydro_14_CS
 
Glyco_hydro_14B_pln
 
Glycoside hydrolase, family 14
 
Glycoside_hydrolase_SF
Gene ontology(3 items)
BP
polysaccharide catabolic process
MF
beta-amylase activity
MF
amylopectin maltohydrolase activity
GO slim(3 items)
BP
polysaccharide metabolic process
BP
macromolecule catabolic process
MF
hydrolase activity

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.