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Arabidopsis thaliana

Assembly Name:TAIR10

Gene File:Araport11_genes.201606.pep.fasta.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
AT2G30010.2
PEP
AT2G30010.2
Position on the Genome Chromosome Chr2
Start Position 12805704
End Position 12809226
Strand +
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI01145419
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
Trichome birefringence-like 45/PMR5
Gene ID
Ortholog group unique ID
Functional annotation Source DB
trembl
Protein name
TRICHOME BIREFRINGENCE-LIKE 45
Accession
CrossRef Refseq from UniProt
EC
NA
KEGG entry
NA
KO ID
NA
Pfam ID
PF14416,PF13839
Pfam Description Details
InterPro ID
IPR029981,IPR026057,IPR025846,IPR029962
InterPro Description Details
GO ID
GO:0016021
GO Description Details
GOslim ID
GO:0016020
GO slim Description Details
Transcription Factor (TF) family 
NA
TF family Description
NA
Best hit taxonomy Species Arabidopsis thaliana
Family Brassicaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments
gene , 遺伝子 , ecotype Col-0 , Brassicaceae , アブラナ科 , Arabidopsis , シロイヌナズナ属 , Thale cress , シロイヌナズナ Thale cress , シロイヌナズナ

Annotation Details

ID
Group/Domain
Name
Link
Source Annotation(1 item)
 
TRICHOME BIREFRINGENCE-LIKE 45
OrthoDB(1 item)
101792at33090
Trichome birefringence-like 45/PMR5
Pfam(2 items)
 
PMR5 N terminal Domain
 
GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p
InterPro(4 items)
 
PMR5 N-terminal domain
Gene ontology(1 item)
CC
integral component of membrane
GO slim(1 item)

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.