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Arabidopsis thaliana

Assembly Name:TAIR10

Gene File:Araport11_genes.201606.pep.fasta.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
AT2G28110.1
PEP
AT2G28110.1
Position on the Genome Chromosome Chr2
Start Position 11978024
End Position 11979641
Strand -
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI00320885
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
Exostosin-like
Gene ID
Ortholog group unique ID
Functional annotation Source DB
trembl
Protein name
IRX7
Accession
CrossRef Refseq from UniProt
NA
EC
NA
KEGG entry
NA
KO ID
NA
Pfam ID
PF03016
Pfam Description Details
InterPro ID
IPR004263,IPR040911
InterPro Description Details
GO ID
GO:0016757,GO:0006486,GO:0016021,GO:0000139
GO Description Details
GOslim ID
GO:0005794,GO:0006464,GO:0009059,GO:0016740,GO:0016020
GO slim Description Details
Transcription Factor (TF) family 
NA
TF family Description
NA
Best hit taxonomy Species Arabidopsis thaliana
Family Brassicaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments
gene , 遺伝子 , ecotype Col-0 , Brassicaceae , アブラナ科 , Arabidopsis , シロイヌナズナ属 , Thale cress , シロイヌナズナ Thale cress , シロイヌナズナ

Annotation Details

ID
Group/Domain
Name
Link
Source Annotation(1 item)
OrthoDB(1 item)
100724at33090
Exostosin-like
Pfam(1 item)
 
Exostosin family
InterPro(2 items)
 
Exostosin-like
 
Exostosin_GT47
Gene ontology(4 items)
MF
transferase activity, transferring glycosyl groups
BP
protein glycosylation
CC
integral component of membrane
CC
Golgi membrane
GO slim(5 items)
CC
Golgi apparatus
BP
cellular protein modification process
BP
macromolecule biosynthetic process
MF
transferase activity

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.