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Arabidopsis thaliana

Assembly Name:TAIR10

Gene File:Araport11_genes.201606.pep.fasta.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
AT2G27500.1
PEP
AT2G27500.1
Position on the Genome Chromosome Chr2
Start Position 11752364
End Position 11753844
Strand -
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI00689121
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
Glycoside hydrolase family 17
Gene ID
Ortholog group unique ID
Functional annotation Source DB
swissprot
Protein name
Glucan endo-1,3-beta-glucosidase 14
Accession
CrossRef Refseq from UniProt
EC
KEGG entry
NA
KO ID
NA
Pfam ID
PF00332
Pfam Description Details
InterPro ID
IPR000490,IPR017853
InterPro Description Details
GO ID
GO:0046658,GO:0005618,GO:0042973,GO:0005634,GO:0006952,GO:0005576,GO:0071555,GO:0005737,GO:0005975
GO Description Details
GOslim ID
GO:0005975,GO:0005576,GO:0016787,GO:0005618,GO:0005634,GO:0016020,GO:0005737,GO:0050896,GO:0071555
GO slim Description Details
Transcription Factor (TF) family 
NA
TF family Description
NA
Best hit taxonomy Species Arabidopsis thaliana
Family Brassicaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments
gene , 遺伝子 , ecotype Col-0 , Brassicaceae , アブラナ科 , Arabidopsis , シロイヌナズナ属 , Thale cress , シロイヌナズナ Thale cress , シロイヌナズナ

Annotation Details

ID
Group/Domain
Name
Link
Source Annotation(2 items)
 
Glucan endo-1,3-beta-glucosidase 14
OrthoDB(1 item)
110322at33090
Glycoside hydrolase family 17
Pfam(1 item)
 
Glycosyl hydrolases family 17
InterPro(2 items)
 
Glycoside hydrolase family 17
 
Glycoside_hydrolase_SF
Gene ontology(9 items)
CC
anchored component of plasma membrane
MF
glucan endo-1,3-beta-D-glucosidase activity
BP
defense response
CC
extracellular region
BP
cell wall organization
BP
carbohydrate metabolic process
GO slim(9 items)
BP
carbohydrate metabolic process
CC
extracellular region
MF
hydrolase activity
BP
response to stimulus
BP
cell wall organization

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.