Plant GARDEN How To ▶︎

JA

EN

Arabidopsis thaliana

Assembly Name:TAIR10

Gene File:Araport11_genes.201606.pep.fasta.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
AT2G26780.1
PEP
AT2G26780.1
Position on the Genome Chromosome Chr2
Start Position 11410125
End Position 11423598
Strand +
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI00873617
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
Proteasome component Ecm29
Gene ID
Ortholog group unique ID
Functional annotation Source DB
trembl
Protein name
ARM repeat superfamily protein
Accession
CrossRef Refseq from UniProt
EC
NA
KEGG entry
NA
KO ID
NA
Pfam ID
PF13001
Pfam Description Details
InterPro ID
IPR016024,IPR011989,IPR024372
InterPro Description Details
GO ID
GO:0060090,GO:0043248,GO:0005737
GO Description Details
GOslim ID
GO:0065003,GO:0005737,GO:0060090
GO slim Description Details
Transcription Factor (TF) family 
NA
TF family Description
NA
Best hit taxonomy Species Arabidopsis thaliana
Family Brassicaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments
gene , 遺伝子 , ecotype Col-0 , Brassicaceae , アブラナ科 , Arabidopsis , シロイヌナズナ属 , Thale cress , シロイヌナズナ Thale cress , シロイヌナズナ

Annotation Details

ID
Group/Domain
Name
Link
Source Annotation(1 item)
 
ARM repeat superfamily protein
OrthoDB(1 item)
3144at33090
Proteasome component Ecm29
Pfam(1 item)
 
Proteasome stabiliser
InterPro(3 items)
 
ARM-type_fold
 
Proteasome component Ecm29
Gene ontology(3 items)
MF
molecular adaptor activity
BP
proteasome assembly
GO slim(3 items)
BP
protein-containing complex assembly
MF
molecular adaptor activity

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.