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Arabidopsis thaliana

Assembly Name:TAIR10

Gene File:Araport11_genes.201606.pep.fasta.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
AT2G26560.1
PEP
AT2G26560.1
Position on the Genome Chromosome Chr2
Start Position 11293912
End Position 11295708
Strand -
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI00248884
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
Patatin
Gene ID
Ortholog group unique ID
Functional annotation Source DB
swissprot
Protein name
Patatin-like protein 2
Accession
CrossRef Refseq from UniProt
EC
KEGG entry
NA
KO ID
NA
Pfam ID
PF01734
Pfam Description Details
InterPro ID
IPR002641,IPR016035
InterPro Description Details
GO ID
GO:0009626,GO:0042802,GO:0005737,GO:0005777,GO:0031408,GO:0016298,GO:0051607,GO:0047372,GO:0046686,GO:0004620,GO:0016020,GO:0006629,GO:0071456,GO:0016042
GO Description Details
GOslim ID
GO:0002376,GO:0016787,GO:0005737,GO:0006082,GO:0044419,GO:0044255,GO:0050896,GO:0042579,GO:0005515,GO:0006629,GO:0016020
GO slim Description Details
Transcription Factor (TF) family 
NA
TF family Description
NA
Best hit taxonomy Species Arabidopsis thaliana
Family Brassicaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments
gene , 遺伝子 , ecotype Col-0 , Brassicaceae , アブラナ科 , Arabidopsis , シロイヌナズナ属 , Thale cress , シロイヌナズナ Thale cress , シロイヌナズナ

Annotation Details

ID
Group/Domain
Name
Link
Source Annotation(2 items)
 
Patatin-like protein 2
OrthoDB(1 item)
Pfam(1 item)
 
Patatin-like phospholipase
InterPro(2 items)
 
Patatin-like phospholipase domain
 
Acyl_Trfase/lysoPLipase
Gene ontology(14 items)
BP
plant-type hypersensitive response
MF
identical protein binding
BP
oxylipin biosynthetic process
MF
lipase activity
BP
defense response to virus
MF
acylglycerol lipase activity
BP
response to cadmium ion
MF
phospholipase activity
BP
lipid metabolic process
BP
cellular response to hypoxia
BP
lipid catabolic process
GO slim(11 items)
BP
immune system process
MF
hydrolase activity
BP
organic acid metabolic process
BP
interspecies interaction between organisms
BP
cellular lipid metabolic process
BP
response to stimulus
MF
protein binding
BP
lipid metabolic process

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.