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Arabidopsis thaliana

Assembly Name:TAIR10

Gene File:Araport11_genes.201606.pep.fasta.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
AT2G24790.1
PEP
AT2G24790.1
Position on the Genome Chromosome Chr2
Start Position 10566959
End Position 10567946
Strand +
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI00191549
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
CCT domain
Gene ID
Ortholog group unique ID
Functional annotation Source DB
swissprot
Protein name
Zinc finger protein CONSTANS-LIKE 3
Accession
CrossRef Refseq from UniProt
EC
NA
KEGG entry
NA
KO ID
NA
Pfam ID
PF00643,PF06203
Pfam Description Details
InterPro ID
IPR010402,IPR000315
InterPro Description Details
GO ID
GO:0003700,GO:0010099,GO:0010161,GO:0005634,GO:0009909,GO:0043565,GO:0008270
GO Description Details
GOslim ID
GO:0032501,GO:0050789,GO:0007154,GO:0050896,GO:0000003,GO:0003676,GO:0032502,GO:0006351,GO:0065009,GO:0005634,GO:0043167
GO slim Description Details
Transcription Factor (TF) family 
TF family Description
CO-like family protein
Best hit taxonomy Species Arabidopsis thaliana
Family Brassicaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments
gene , 遺伝子 , ecotype Col-0 , Brassicaceae , アブラナ科 , Arabidopsis , シロイヌナズナ属 , Thale cress , シロイヌナズナ Thale cress , シロイヌナズナ

Annotation Details

ID
Group/Domain
Name
Link
Source Annotation(1 item)
 
Zinc finger protein CONSTANS-LIKE 3
OrthoDB(1 item)
138320at33090
CCT domain
Pfam(2 items)
 
B-box zinc finger
 
CCT motif
InterPro(2 items)
 
B-box-type zinc finger
Gene ontology(7 items)
MF
DNA-binding transcription factor activity
BP
regulation of photomorphogenesis
BP
red light signaling pathway
BP
regulation of flower development
MF
sequence-specific DNA binding
MF
zinc ion binding
GO slim(11 items)
BP
multicellular organismal process
BP
regulation of biological process
BP
cell communication
BP
response to stimulus
MF
nucleic acid binding
BP
developmental process
BP
transcription, DNA-templated
BP
regulation of molecular function

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.