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Arabidopsis thaliana

Assembly Name:TAIR10

Gene File:Araport11_genes.201606.pep.fasta.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
AT2G24190.2
PEP
AT2G24190.2
Position on the Genome Chromosome Chr2
Start Position 10283740
End Position 10284934
Strand -
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI01962071
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
Short-chain dehydrogenase/reductase SDR
Gene ID
Ortholog group unique ID
Functional annotation Source DB
swissprot
Protein name
Short-chain dehydrogenase/reductase 2b
Accession
CrossRef Refseq from UniProt
EC
KEGG entry
KO ID
NA
Pfam ID
PF00106
Pfam Description Details
InterPro ID
IPR036291,IPR002347
InterPro Description Details
GO ID
GO:0055114,GO:0005829,GO:0016020,GO:0008106
GO Description Details
GOslim ID
GO:0016491,GO:0016020,GO:0055114,GO:0005737
GO slim Description Details
Transcription Factor (TF) family 
NA
TF family Description
NA
Best hit taxonomy Species Arabidopsis thaliana
Family Brassicaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments ath:AT2G24190
gene , 遺伝子 , ecotype Col-0 , Brassicaceae , アブラナ科 , Arabidopsis , シロイヌナズナ属 , Thale cress , シロイヌナズナ Thale cress , シロイヌナズナ

Annotation Details

ID
Group/Domain
Name
Link
Source Annotation(2 items)
 
Short-chain dehydrogenase/reductase 2b
OrthoDB(1 item)
129454at33090
Short-chain dehydrogenase/reductase SDR
Pfam(1 item)
 
short chain dehydrogenase
InterPro(2 items)
 
NAD(P)-bd_dom_sf
 
Short-chain dehydrogenase/reductase SDR
Gene ontology(4 items)
BP
obsolete oxidation-reduction process
MF
alcohol dehydrogenase (NADP+) activity
GO slim(4 items)
MF
oxidoreductase activity
BP
oxidation-reduction process

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.