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Arabidopsis thaliana

Assembly Name:TAIR10

Gene File:Araport11_genes.201606.pep.fasta.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
AT2G23320.1
PEP
AT2G23320.1
Position on the Genome Chromosome Chr2
Start Position 9924998
End Position 9926154
Strand +
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI00404088
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
WRKY domain
Gene ID
Ortholog group unique ID
Functional annotation Source DB
swissprot
Protein name
Probable WRKY transcription factor 15
Accession
CrossRef Refseq from UniProt
EC
NA
KEGG entry
NA
KO ID
NA
Pfam ID
PF10533,PF03106
Pfam Description Details
InterPro ID
IPR003657,IPR036576,IPR018872
InterPro Description Details
GO ID
GO:0003700,GO:0005634,GO:0010200,GO:0000976,GO:0005516
GO Description Details
GOslim ID
GO:0003676,GO:0005634,GO:0005515,GO:0065009,GO:0006351,GO:0050789,GO:0050896
GO slim Description Details
Transcription Factor (TF) family 
TF family Description
WRKY family protein
Best hit taxonomy Species Arabidopsis thaliana
Family Brassicaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments
gene , 遺伝子 , ecotype Col-0 , Brassicaceae , アブラナ科 , Arabidopsis , シロイヌナズナ属 , Thale cress , シロイヌナズナ Thale cress , シロイヌナズナ

Annotation Details

ID
Group/Domain
Name
Link
Source Annotation(1 item)
 
Probable WRKY transcription factor 15
OrthoDB(1 item)
167308at33090
WRKY domain
Pfam(2 items)
 
Plant zinc cluster domain
 
WRKY DNA -binding domain
InterPro(3 items)
 
Zn-cluster domain
Gene ontology(5 items)
MF
DNA-binding transcription factor activity
BP
response to chitin
MF
transcription regulatory region sequence-specific DNA binding
MF
calmodulin binding
GO slim(7 items)
MF
nucleic acid binding
MF
protein binding
BP
regulation of molecular function
BP
transcription, DNA-templated
BP
regulation of biological process
BP
response to stimulus

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.