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Arabidopsis thaliana

Assembly Name:TAIR10

Gene File:Araport11_genes.201606.pep.fasta.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
AT2G23290.1
PEP
AT2G23290.1
Position on the Genome Chromosome Chr2
Start Position 9904895
End Position 9905824
Strand -
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI01554802
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
SANT/Myb domain
Gene ID
Ortholog group unique ID
Functional annotation Source DB
trembl
Protein name
At2g23280
Accession
CrossRef Refseq from UniProt
EC
NA
KEGG entry
KO ID
NA
Pfam ID
PF00249
Pfam Description Details
InterPro ID
IPR017930,IPR001005,IPR009057
InterPro Description Details
GO ID
GO:0000978,GO:0000981,GO:0006355,GO:0005634,GO:0003700,GO:0000976
GO Description Details
GOslim ID
GO:0050789,GO:0006351,GO:0065009,GO:0005634,GO:0003676,GO:0005694
GO slim Description Details
Transcription Factor (TF) family 
TF family Description
MYB family protein
Best hit taxonomy Species Arabidopsis thaliana
Family Brassicaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments ath:AT2G23290
gene , 遺伝子 , ecotype Col-0 , Brassicaceae , アブラナ科 , Arabidopsis , シロイヌナズナ属 , Thale cress , シロイヌナズナ Thale cress , シロイヌナズナ

Annotation Details

ID
Group/Domain
Name
Link
Source Annotation(1 item)
 
At2g23280
OrthoDB(1 item)
183265at33090
SANT/Myb domain
Pfam(1 item)
 
Myb-like DNA-binding domain
InterPro(3 items)
 
SANT/Myb domain
 
Homeobox-like_sf
Gene ontology(6 items)
MF
RNA polymerase II cis-regulatory region sequence-specific DNA binding
MF
DNA-binding transcription factor activity, RNA polymerase II-specific
BP
regulation of transcription, DNA-templated
MF
DNA-binding transcription factor activity
MF
transcription regulatory region sequence-specific DNA binding
GO slim(6 items)
BP
regulation of biological process
BP
transcription, DNA-templated
BP
regulation of molecular function
MF
nucleic acid binding

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.