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Arabidopsis thaliana

Assembly Name:TAIR10

Gene File:Araport11_genes.201606.pep.fasta.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
AT2G20570.2
PEP
AT2G20570.2
Position on the Genome Chromosome Chr2
Start Position 8855486
End Position 8857522
Strand +
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI00775055
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
Myb domain
Gene ID
Ortholog group unique ID
Functional annotation Source DB
trembl
Protein name
GBFs pro-rich region-interacting factor 1
Accession
CrossRef Refseq from UniProt
EC
NA
KEGG entry
NA
KO ID
NA
Pfam ID
PF00249
Pfam Description Details
InterPro ID
IPR001005,IPR009057,IPR017930,IPR006447
InterPro Description Details
GO ID
GO:0007165,GO:0010380,GO:0005634,GO:0009658,GO:0009910,GO:0003700,GO:0045893
GO Description Details
GOslim ID
GO:0042440,GO:0009657,GO:0032502,GO:0000003,GO:0050789,GO:0065009,GO:0032501,GO:0003676,GO:0006807,GO:0005634,GO:0007154,GO:0006725,GO:0006351,GO:0046483,GO:0050896
GO slim Description Details
Transcription Factor (TF) family 
TF family Description
G2-like family protein
Best hit taxonomy Species Arabidopsis thaliana
Family Brassicaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments
gene , 遺伝子 , ecotype Col-0 , Brassicaceae , アブラナ科 , Arabidopsis , シロイヌナズナ属 , Thale cress , シロイヌナズナ Thale cress , シロイヌナズナ

Annotation Details

ID
Group/Domain
Name
Link
Source Annotation(1 item)
 
GBFs pro-rich region-interacting factor 1
OrthoDB(1 item)
143330at33090
Myb domain
Pfam(1 item)
 
Myb-like DNA-binding domain
InterPro(4 items)
 
SANT/Myb domain
 
Homeobox-like_sf
 
Myb_dom_plants
Gene ontology(7 items)
BP
signal transduction
BP
regulation of chlorophyll biosynthetic process
BP
chloroplast organization
BP
negative regulation of flower development
MF
DNA-binding transcription factor activity
BP
positive regulation of transcription, DNA-templated
GO slim(15 items)
BP
pigment metabolic process
BP
plastid organization
BP
developmental process
BP
regulation of biological process
BP
regulation of molecular function
BP
multicellular organismal process
MF
nucleic acid binding
BP
nitrogen compound metabolic process
BP
cell communication
BP
cellular aromatic compound metabolic process
BP
transcription, DNA-templated
BP
heterocycle metabolic process
BP
response to stimulus

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.