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Arabidopsis thaliana

Assembly Name:TAIR10

Gene File:Araport11_genes.201606.pep.fasta.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
AT2G18040.1
PEP
AT2G18040.1
Position on the Genome Chromosome Chr2
Start Position 7842346
End Position 7843537
Strand +
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI00194012
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
Peptidyl-prolyl cis-trans isomerase
Gene ID
Ortholog group unique ID
Functional annotation Source DB
swissprot
Protein name
Peptidyl-prolyl cis-trans isomerase Pin1
Accession
CrossRef Refseq from UniProt
EC
KEGG entry
KO ID
NA
Pfam ID
PF00639
Pfam Description Details
InterPro ID
IPR023058,IPR000297
InterPro Description Details
GO ID
GO:0009506,GO:0009909,GO:0051726,GO:0005829,GO:0005886,GO:0005739,GO:0005783,GO:0005634,GO:0032880,GO:0003755,GO:0009630
GO Description Details
GOslim ID
GO:0006464,GO:0016020,GO:0005634,GO:0005739,GO:0005737,GO:0032501,GO:0016853,GO:0055044,GO:0032502,GO:0000003,GO:0050789,GO:0050896,GO:0007049,GO:0005783,GO:0051179
GO slim Description Details
Transcription Factor (TF) family 
NA
TF family Description
NA
Best hit taxonomy Species Arabidopsis thaliana
Family Brassicaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments ath:AT2G18040
gene , 遺伝子 , ecotype Col-0 , Brassicaceae , アブラナ科 , Arabidopsis , シロイヌナズナ属 , Thale cress , シロイヌナズナ Thale cress , シロイヌナズナ

Annotation Details

ID
Group/Domain
Name
Link
Source Annotation(2 items)
 
Peptidyl-prolyl cis-trans isomerase Pin1
OrthoDB(1 item)
224745at33090
Peptidyl-prolyl cis-trans isomerase
Pfam(1 item)
 
PPIC-type PPIASE domain
InterPro(2 items)
 
PPIase_PpiC_CS
 
Peptidyl-prolyl cis-trans isomerase, PpiC-type
Gene ontology(11 items)
BP
regulation of flower development
BP
regulation of cell cycle
CC
plasma membrane
CC
mitochondrion
CC
endoplasmic reticulum
BP
regulation of protein localization
MF
peptidyl-prolyl cis-trans isomerase activity
GO slim(15 items)
BP
cellular protein modification process
CC
mitochondrion
BP
multicellular organismal process
MF
isomerase activity
BP
developmental process
BP
regulation of biological process
BP
response to stimulus
CC
endoplasmic reticulum

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.