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Arabidopsis thaliana

Assembly Name:TAIR10

Gene File:Araport11_genes.201606.pep.fasta.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
AT2G04540.1
PEP
AT2G04540.1
Position on the Genome Chromosome Chr2
Start Position 1581521
End Position 1584635
Strand -
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI00319928
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
Beta-ketoacyl synthase, C-terminal
Gene ID
Ortholog group unique ID
Functional annotation Source DB
trembl
Protein name
3-oxoacyl-[acyl-carrier-protein] synthase
Accession
CrossRef Refseq from UniProt
NA
EC
NA
KEGG entry
NA
KO ID
NA
Pfam ID
PF00109,PF02801
Pfam Description Details
InterPro ID
IPR016039,IPR014030,IPR000794,IPR020841,IPR014031,IPR017568
InterPro Description Details
GO ID
GO:0016747,GO:0006633
GO Description Details
GOslim ID
GO:0006082,GO:0016740,GO:0044255
GO slim Description Details
Transcription Factor (TF) family 
NA
TF family Description
NA
Best hit taxonomy Species Arabidopsis thaliana
Family Brassicaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments
gene , 遺伝子 , ecotype Col-0 , Brassicaceae , アブラナ科 , Arabidopsis , シロイヌナズナ属 , Thale cress , シロイヌナズナ Thale cress , シロイヌナズナ

Annotation Details

ID
Group/Domain
Name
Link
Source Annotation(1 item)
 
3-oxoacyl-[acyl-carrier-protein] synthase
OrthoDB(1 item)
83749at33090
Beta-ketoacyl synthase, C-terminal
Pfam(2 items)
 
Beta-ketoacyl synthase, N-terminal domain
 
Beta-ketoacyl synthase, C-terminal domain
InterPro(6 items)
 
Thiolase-like
 
Beta-ketoacyl synthase, N-terminal
 
Beta-ketoacyl_synthase
 
PKS_Beta-ketoAc_synthase_dom
 
Beta-ketoacyl synthase, C-terminal
 
3-oxoacyl-ACP_synth-2
Gene ontology(2 items)
MF
transferase activity, transferring acyl groups other than amino-acyl groups
BP
fatty acid biosynthetic process
GO slim(3 items)
BP
organic acid metabolic process
MF
transferase activity
BP
cellular lipid metabolic process

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.