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Arabidopsis thaliana

Assembly Name:TAIR10

Gene File:Araport11_genes.201606.pep.fasta.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
AT2G02720.1
PEP
AT2G02720.1
Position on the Genome Chromosome Chr2
Start Position 763173
End Position 764834
Strand +
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI00306017
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
Pectate lyase
Gene ID
Ortholog group unique ID
Functional annotation Source DB
trembl
Protein name
Pectate lyase
Accession
CrossRef Refseq from UniProt
NA
EC
KEGG entry
NA
KO ID
NA
Pfam ID
PF04431,PF00544
Pfam Description Details
InterPro ID
IPR002022,IPR007524,IPR012334,IPR011050,IPR018082
InterPro Description Details
GO ID
GO:0045490,GO:0046872,GO:0030570
GO Description Details
GOslim ID
GO:0009057,GO:0016829,GO:0005976,GO:0043167
GO slim Description Details
Transcription Factor (TF) family 
NA
TF family Description
NA
Best hit taxonomy Species Arabidopsis thaliana
Family Brassicaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments
gene , 遺伝子 , ecotype Col-0 , Brassicaceae , アブラナ科 , Arabidopsis , シロイヌナズナ属 , Thale cress , シロイヌナズナ Thale cress , シロイヌナズナ

Annotation Details

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.