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Arabidopsis thaliana

Assembly Name:TAIR10

Gene File:Araport11_genes.201606.pep.fasta.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
AT2G01980.1
PEP
AT2G01980.1
Position on the Genome Chromosome Chr2
Start Position 457070
End Position 463145
Strand +
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI00011952
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
Cation/H+ exchanger
Gene ID
Ortholog group unique ID
Functional annotation Source DB
trembl
Protein name
Salt overly sensitive 1
Accession
CrossRef Refseq from UniProt
NA
EC
NA
KEGG entry
NA
KO ID
NA
Pfam ID
PF00999
Pfam Description Details
InterPro ID
IPR018490,IPR000595,IPR018422,IPR006153
InterPro Description Details
GO ID
GO:0015299,GO:0016021,GO:0006814
GO Description Details
GOslim ID
GO:1902600,GO:0016020,GO:0005215,GO:0006811
GO slim Description Details
Transcription Factor (TF) family 
NA
TF family Description
NA
Best hit taxonomy Species Arabidopsis thaliana
Family Brassicaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments
gene , 遺伝子 , ecotype Col-0 , Brassicaceae , アブラナ科 , Arabidopsis , シロイヌナズナ属 , Thale cress , シロイヌナズナ Thale cress , シロイヌナズナ

Annotation Details

ID
Group/Domain
Name
Link
Source Annotation(1 item)
 
Salt overly sensitive 1
OrthoDB(1 item)
8266at33090
Cation/H+ exchanger
Pfam(1 item)
 
Sodium/hydrogen exchanger family
InterPro(4 items)
 
Cyclic nucleotide-binding domain
 
Cation/H_exchanger_CPA1
 
Cation/H+ exchanger
Gene ontology(3 items)
MF
solute:proton antiporter activity
CC
integral component of membrane
BP
sodium ion transport
GO slim(4 items)
BP
proton transmembrane transport
MF
transporter activity
BP
ion transport

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.