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Arabidopsis thaliana

Assembly Name:TAIR10

Gene File:Araport11_genes.201606.pep.fasta.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
AT1G79430.2
PEP
AT1G79430.2
Position on the Genome Chromosome Chr1
Start Position 29877521
End Position 29879135
Strand -
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI04878638
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
Myb domain
Gene ID
Ortholog group unique ID
Functional annotation Source DB
trembl
Protein name
Uncharacterized protein
Accession
CrossRef Refseq from UniProt
NA
EC
NA
KEGG entry
NA
KO ID
NA
Pfam ID
PF00249,PF14379
Pfam Description Details
InterPro ID
IPR025756,IPR006447,IPR001005,IPR009057
InterPro Description Details
GO ID
GO:0005634
GO Description Details
GOslim ID
GO:0005634
GO slim Description Details
Transcription Factor (TF) family 
TF family Description
G2-like family protein
Best hit taxonomy Species Arabidopsis thaliana
Family Brassicaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments
gene , 遺伝子 , ecotype Col-0 , Brassicaceae , アブラナ科 , Arabidopsis , シロイヌナズナ属 , Thale cress , シロイヌナズナ Thale cress , シロイヌナズナ

Annotation Details

ID
Group/Domain
Name
Link
Source Annotation(1 item)
 
Uncharacterized protein
OrthoDB(1 item)
148189at33090
Myb domain
Pfam(2 items)
 
Myb-like DNA-binding domain
 
MYB-CC type transfactor, LHEQLE motif
InterPro(4 items)
 
MYB-CC type transcription factor, LHEQLE-containing domain
 
Myb_dom_plants
 
SANT/Myb domain
 
Homeobox-like_sf
Gene ontology(1 item)
GO slim(1 item)

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.