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Arabidopsis thaliana

Assembly Name:TAIR10

Gene File:Araport11_genes.201606.pep.fasta.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
AT1G77550.1
PEP
AT1G77550.1
Position on the Genome Chromosome Chr1
Start Position 29138490
End Position 29142965
Strand -
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI01528095
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
Tubulin--tyrosine ligase-like protein 12
Gene ID
Ortholog group unique ID
Functional annotation Source DB
trembl
Protein name
At1g77550
Accession
CrossRef Refseq from UniProt
EC
NA
KEGG entry
KO ID
NA
Pfam ID
PF03133
Pfam Description Details
InterPro ID
IPR013815,IPR004344,IPR027749
InterPro Description Details
GO ID
GO:0006464,GO:0016874,GO:0005524
GO Description Details
GOslim ID
GO:0000166,GO:0006464,GO:0016874,GO:0043167
GO slim Description Details
Transcription Factor (TF) family 
NA
TF family Description
NA
Best hit taxonomy Species Arabidopsis thaliana
Family Brassicaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments ath:AT1G77550
gene , 遺伝子 , ecotype Col-0 , Brassicaceae , アブラナ科 , Arabidopsis , シロイヌナズナ属 , Thale cress , シロイヌナズナ Thale cress , シロイヌナズナ

Annotation Details

ID
Group/Domain
Name
Link
Source Annotation(1 item)
 
At1g77550
OrthoDB(1 item)
17405at33090
Tubulin--tyrosine ligase-like protein 12
Pfam(1 item)
 
Tubulin-tyrosine ligase family
InterPro(3 items)
 
ATP_grasp_subdomain_1
 
Tubulin-tyrosine ligase/Tubulin polyglutamylase
Gene ontology(3 items)
BP
cellular protein modification process
MF
ligase activity
GO slim(4 items)
MF
nucleotide binding
BP
cellular protein modification process
MF
ligase activity

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.