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Arabidopsis thaliana

Assembly Name:TAIR10

Gene File:Araport11_genes.201606.pep.fasta.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
AT1G76080.1
PEP
AT1G76080.1
Position on the Genome Chromosome Chr1
Start Position 28548063
End Position 28549348
Strand -
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI00388803
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
Thioredoxin
Gene ID
Ortholog group unique ID
Functional annotation Source DB
swissprot
Protein name
Thioredoxin-like protein CDSP32, chloroplastic
Accession
CrossRef Refseq from UniProt
EC
NA
KEGG entry
NA
KO ID
NA
Pfam ID
PF00085
Pfam Description Details
InterPro ID
IPR036249,IPR013766
InterPro Description Details
GO ID
GO:0016671,GO:0009507,GO:0009570,GO:0006979,GO:0009414,GO:0045454,GO:0009941,GO:0005739
GO Description Details
GOslim ID
GO:0050896,GO:0009536,GO:0005739,GO:0016491,GO:0065008,GO:0050789
GO slim Description Details
Transcription Factor (TF) family 
NA
TF family Description
NA
Best hit taxonomy Species Arabidopsis thaliana
Family Brassicaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments
gene , 遺伝子 , ecotype Col-0 , Brassicaceae , アブラナ科 , Arabidopsis , シロイヌナズナ属 , Thale cress , シロイヌナズナ Thale cress , シロイヌナズナ

Annotation Details

ID
Group/Domain
Name
Link
Source Annotation(1 item)
 
Thioredoxin-like protein CDSP32, chloroplastic
OrthoDB(1 item)
146354at33090
Thioredoxin
Pfam(1 item)
 
Thioredoxin
InterPro(2 items)
 
Thioredoxin-like_sf
 
Thioredoxin domain
Gene ontology(8 items)
MF
oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor
CC
chloroplast stroma
BP
response to oxidative stress
BP
response to water deprivation
BP
cell redox homeostasis
CC
chloroplast envelope
CC
mitochondrion
GO slim(6 items)
BP
response to stimulus
CC
mitochondrion
MF
oxidoreductase activity
BP
regulation of biological quality
BP
regulation of biological process

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.