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Arabidopsis thaliana

Assembly Name:TAIR10

Gene File:Araport11_genes.201606.pep.fasta.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
AT1G74250.1
PEP
AT1G74250.1
Position on the Genome Chromosome Chr1
Start Position 27920328
End Position 27922414
Strand +
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI00559214
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
DnaJ domain
Gene ID
Ortholog group unique ID
Functional annotation Source DB
swissprot
Protein name
DNAJ protein JJJ1 homolog
Accession
CrossRef Refseq from UniProt
EC
NA
KEGG entry
KO ID
NA
Pfam ID
PF00226,PF12171
Pfam Description Details
InterPro ID
IPR036869,IPR036236,IPR003604,IPR013087,IPR001623,IPR022755,IPR018253
InterPro Description Details
GO ID
GO:0005634,GO:0003676,GO:0008270
GO Description Details
GOslim ID
GO:0003676,GO:0005634,GO:0043167
GO slim Description Details
Transcription Factor (TF) family 
TF family Description
C2H2 family protein
Best hit taxonomy Species Arabidopsis thaliana
Family Brassicaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments ath:AT1G74250
gene , 遺伝子 , ecotype Col-0 , Brassicaceae , アブラナ科 , Arabidopsis , シロイヌナズナ属 , Thale cress , シロイヌナズナ Thale cress , シロイヌナズナ

Annotation Details

ID
Group/Domain
Name
Link
Source Annotation(1 item)
 
DNAJ protein JJJ1 homolog
OrthoDB(1 item)
194025at33090
DnaJ domain
Pfam(2 items)
 
DnaJ domain
 
Zinc-finger double-stranded RNA-binding
InterPro(7 items)
 
Matrin/U1-like-C_Znf_C2H2
 
Zinc finger C2H2-type
 
Zinc finger, double-stranded RNA binding
 
DnaJ_domain_CS
Gene ontology(3 items)
MF
nucleic acid binding
MF
zinc ion binding
GO slim(3 items)
MF
nucleic acid binding

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.