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Arabidopsis thaliana

Assembly Name:TAIR10

Gene File:Araport11_genes.201606.pep.fasta.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
AT1G73870.1
PEP
AT1G73870.1
Position on the Genome Chromosome Chr1
Start Position 27779214
End Position 27780522
Strand +
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI00465323
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
CCT domain
Gene ID
Ortholog group unique ID
Functional annotation Source DB
swissprot
Protein name
Zinc finger protein CONSTANS-LIKE 7
Accession
CrossRef Refseq from UniProt
EC
NA
KEGG entry
NA
KO ID
NA
Pfam ID
PF00643,PF06203
Pfam Description Details
InterPro ID
IPR000315,IPR010402
InterPro Description Details
GO ID
GO:0006355,GO:0010223,GO:0005730,GO:0005634,GO:0003700,GO:0008270,GO:0045893,GO:0009641
GO Description Details
GOslim ID
GO:0050789,GO:0003676,GO:0043167,GO:0006351,GO:0032501,GO:0065009,GO:0005730,GO:0032502,GO:0050896,GO:0005634
GO slim Description Details
Transcription Factor (TF) family 
TF family Description
CO-like family protein
Best hit taxonomy Species Arabidopsis thaliana
Family Brassicaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments
gene , 遺伝子 , ecotype Col-0 , Brassicaceae , アブラナ科 , Arabidopsis , シロイヌナズナ属 , Thale cress , シロイヌナズナ Thale cress , シロイヌナズナ

Annotation Details

ID
Group/Domain
Name
Link
Source Annotation(1 item)
 
Zinc finger protein CONSTANS-LIKE 7
OrthoDB(1 item)
130783at33090
CCT domain
Pfam(2 items)
 
B-box zinc finger
 
CCT motif
InterPro(2 items)
 
B-box-type zinc finger
Gene ontology(8 items)
BP
regulation of transcription, DNA-templated
BP
secondary shoot formation
MF
DNA-binding transcription factor activity
MF
zinc ion binding
BP
positive regulation of transcription, DNA-templated
BP
shade avoidance
GO slim(10 items)
BP
regulation of biological process
MF
nucleic acid binding
BP
transcription, DNA-templated
BP
multicellular organismal process
BP
regulation of molecular function
BP
developmental process
BP
response to stimulus

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.