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Arabidopsis thaliana

Assembly Name:TAIR10

Gene File:Araport11_genes.201606.pep.fasta.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
AT1G69570.1
PEP
AT1G69570.1
Position on the Genome Chromosome Chr1
Start Position 26161771
End Position 26163230
Strand -
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI02029167
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
Zinc finger, Dof-type
Gene ID
Ortholog group unique ID
Functional annotation Source DB
swissprot
Protein name
Cyclic dof factor 5
Accession
CrossRef Refseq from UniProt
EC
NA
KEGG entry
NA
KO ID
NA
Pfam ID
PF02701
Pfam Description Details
InterPro ID
IPR003851
InterPro Description Details
GO ID
GO:0003677,GO:0046872,GO:0048579,GO:0006355,GO:0005634,GO:0009908,GO:0048577,GO:0003700
GO Description Details
GOslim ID
GO:0032501,GO:0003676,GO:0005634,GO:0043167,GO:0032502,GO:0006351,GO:0050789,GO:0000003,GO:0065009,GO:0050896
GO slim Description Details
Transcription Factor (TF) family 
TF family Description
Dof family protein
Best hit taxonomy Species Arabidopsis thaliana
Family Brassicaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments
gene , 遺伝子 , ecotype Col-0 , Brassicaceae , アブラナ科 , Arabidopsis , シロイヌナズナ属 , Thale cress , シロイヌナズナ Thale cress , シロイヌナズナ

Annotation Details

ID
Group/Domain
Name
Link
Source Annotation(1 item)
 
Cyclic dof factor 5
OrthoDB(1 item)
114661at33090
Zinc finger, Dof-type
Pfam(1 item)
 
Dof domain, zinc finger
InterPro(1 item)
 
Zinc finger, Dof-type
Gene ontology(8 items)
MF
metal ion binding
BP
negative regulation of long-day photoperiodism, flowering
BP
regulation of transcription, DNA-templated
BP
flower development
BP
negative regulation of short-day photoperiodism, flowering
MF
DNA-binding transcription factor activity
GO slim(10 items)
BP
multicellular organismal process
MF
nucleic acid binding
BP
developmental process
BP
transcription, DNA-templated
BP
regulation of biological process
BP
regulation of molecular function
BP
response to stimulus

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.