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Arabidopsis thaliana

Assembly Name:TAIR10

Gene File:Araport11_genes.201606.pep.fasta.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
AT1G69180.1
PEP
AT1G69180.1
Position on the Genome Chromosome Chr1
Start Position 26007734
End Position 26008940
Strand -
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI00662029
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
YABBY protein
Gene ID
Ortholog group unique ID
Functional annotation Source DB
swissprot
Protein name
Protein CRABS CLAW
Accession
CrossRef Refseq from UniProt
EC
NA
KEGG entry
NA
KO ID
NA
Pfam ID
PF04690
Pfam Description Details
InterPro ID
IPR006780,IPR036910
InterPro Description Details
GO ID
GO:0048479,GO:0046872,GO:0005634,GO:0010022,GO:0048440,GO:0043565,GO:0009944,GO:0000976,GO:0006355,GO:0045165,GO:0010582,GO:0010254,GO:0003700,GO:0048366
GO Description Details
GOslim ID
GO:0065009,GO:0006351,GO:0005634,GO:0032502,GO:0003676,GO:0032501,GO:0000003,GO:0050789,GO:0043167
GO slim Description Details
Transcription Factor (TF) family 
TF family Description
YABBY family protein
Best hit taxonomy Species Arabidopsis thaliana
Family Brassicaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments
gene , 遺伝子 , ecotype Col-0 , Brassicaceae , アブラナ科 , Arabidopsis , シロイヌナズナ属 , Thale cress , シロイヌナズナ Thale cress , シロイヌナズナ

Annotation Details

ID
Group/Domain
Name
Link
Source Annotation(1 item)
 
Protein CRABS CLAW
OrthoDB(1 item)
174922at33090
YABBY protein
Pfam(1 item)
 
YABBY protein
InterPro(2 items)
 
YABBY protein
 
HMG_box_dom_sf
Gene ontology(14 items)
BP
style development
MF
metal ion binding
BP
meristem determinacy
BP
carpel development
MF
sequence-specific DNA binding
BP
polarity specification of adaxial/abaxial axis
MF
transcription regulatory region sequence-specific DNA binding
BP
regulation of transcription, DNA-templated
BP
cell fate commitment
BP
floral meristem determinacy
BP
nectary development
MF
DNA-binding transcription factor activity
BP
leaf development
GO slim(9 items)
BP
regulation of molecular function
BP
transcription, DNA-templated
BP
developmental process
MF
nucleic acid binding
BP
multicellular organismal process
BP
regulation of biological process

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.