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Arabidopsis thaliana

Assembly Name:TAIR10

Gene File:Araport11_genes.201606.pep.fasta.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
AT1G68990.2
PEP
AT1G68990.2
Position on the Genome Chromosome Chr1
Start Position 25935499
End Position 25940755
Strand -
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI01371291
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
DNA-directed RNA polymerase
Gene ID
Ortholog group unique ID
Functional annotation Source DB
trembl
Protein name
DNA-directed RNA polymerase
Accession
CrossRef Refseq from UniProt
EC
KEGG entry
NA
KO ID
NA
Pfam ID
PF14700,PF00940
Pfam Description Details
InterPro ID
IPR002092,IPR037159,IPR043502,IPR024075,IPR029262
InterPro Description Details
GO ID
GO:0003899,GO:0009860,GO:0003677,GO:0048481,GO:0006351,GO:0009793
GO Description Details
GOslim ID
GO:0016740,GO:0009059,GO:0032501,GO:0016049,GO:0000003,GO:0003676,GO:0051704,GO:0032502,GO:0016070,GO:0006351
GO slim Description Details
Transcription Factor (TF) family 
NA
TF family Description
NA
Best hit taxonomy Species Arabidopsis thaliana
Family Brassicaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments
gene , 遺伝子 , ecotype Col-0 , Brassicaceae , アブラナ科 , Arabidopsis , シロイヌナズナ属 , Thale cress , シロイヌナズナ Thale cress , シロイヌナズナ

Annotation Details

ID
Group/Domain
Name
Link
Source Annotation(2 items)
 
DNA-directed RNA polymerase
OrthoDB(1 item)
14422at33090
DNA-directed RNA polymerase
Pfam(2 items)
 
DNA-directed RNA polymerase N-terminal
 
DNA-dependent RNA polymerase
InterPro(5 items)
 
DNA-directed RNA polymerase, phage-type
 
DNA/RNA_pol_sf
 
DNA-dir_RNA_pol_helix_hairp_sf
 
DNA-directed RNA polymerase, N-terminal
Gene ontology(6 items)
MF
DNA-directed 5'-3' RNA polymerase activity
BP
pollen tube growth
BP
plant ovule development
BP
transcription, DNA-templated
BP
embryo development ending in seed dormancy
GO slim(10 items)
MF
transferase activity
BP
macromolecule biosynthetic process
BP
multicellular organismal process
MF
nucleic acid binding
BP
multi-organism process
BP
developmental process
BP
RNA metabolic process
BP
transcription, DNA-templated

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.