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Arabidopsis thaliana

Assembly Name:TAIR10

Gene File:Araport11_genes.201606.pep.fasta.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
AT1G68590.1
PEP
AT1G68590.1
Position on the Genome Chromosome Chr1
Start Position 25757593
End Position 25758169
Strand -
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI00583081
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
Ribosomal protein PSRP-3/Ycf65
Gene ID
Ortholog group unique ID
Functional annotation Source DB
swissprot
Protein name
30S ribosomal protein 3-1, chloroplastic
Accession
CrossRef Refseq from UniProt
EC
NA
KEGG entry
KO ID
NA
Pfam ID
PF04839
Pfam Description Details
InterPro ID
IPR038447,IPR006924
InterPro Description Details
GO ID
GO:0009535,GO:0009507,GO:0005840,GO:0009570,GO:0032544,GO:0005739,GO:0009579,GO:0003735
GO Description Details
GOslim ID
GO:0005198,GO:0016020,GO:0009536,GO:0005739,GO:0009579,GO:0005840,GO:0009657
GO slim Description Details
Transcription Factor (TF) family 
NA
TF family Description
NA
Best hit taxonomy Species Arabidopsis thaliana
Family Brassicaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments ath:AT1G68590
gene , 遺伝子 , ecotype Col-0 , Brassicaceae , アブラナ科 , Arabidopsis , シロイヌナズナ属 , Thale cress , シロイヌナズナ Thale cress , シロイヌナズナ

Annotation Details

ID
Group/Domain
Name
Link
Source Annotation(1 item)
 
30S ribosomal protein 3-1, chloroplastic
OrthoDB(1 item)
213508at33090
Ribosomal protein PSRP-3/Ycf65
Pfam(1 item)
 
Plastid and cyanobacterial ribosomal protein (PSRP-3 / Ycf65)
InterPro(2 items)
 
PSRP-3/Ycf65_sf
 
Ribosomal protein PSRP-3/Ycf65
Gene ontology(8 items)
CC
chloroplast thylakoid membrane
CC
chloroplast stroma
BP
plastid translation
CC
mitochondrion
MF
structural constituent of ribosome
GO slim(7 items)
MF
structural molecule activity
CC
mitochondrion
BP
plastid organization

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.