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Arabidopsis thaliana

Assembly Name:TAIR10

Gene File:Araport11_genes.201606.pep.fasta.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
AT1G68360.1
PEP
AT1G68360.1
Position on the Genome Chromosome Chr1
Start Position 25621678
End Position 25622412
Strand -
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI00404283
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
Zinc finger C2H2 superfamily
Gene ID
Ortholog group unique ID
Functional annotation Source DB
swissprot
Protein name
Zinc finger protein GIS3
Accession
CrossRef Refseq from UniProt
EC
NA
KEGG entry
NA
KO ID
NA
Pfam ID
NA
Pfam Description
InterPro ID
IPR013087,IPR036236
InterPro Description Details
GO ID
GO:0000976,GO:0009736,GO:0010026,GO:0046872,GO:0003700,GO:0007275,GO:0005634,GO:0006355,GO:0009740,GO:0010090,GO:0019760
GO Description Details
GOslim ID
GO:0050896,GO:0050789,GO:0032502,GO:0007154,GO:0003676,GO:0065009,GO:0006351,GO:0006082,GO:0006790,GO:0019748,GO:0032501,GO:0006807,GO:0005634,GO:0043167
GO slim Description Details
Transcription Factor (TF) family 
NA
TF family Description
NA
Best hit taxonomy Species Arabidopsis thaliana
Family Brassicaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments
gene , 遺伝子 , ecotype Col-0 , Brassicaceae , アブラナ科 , Arabidopsis , シロイヌナズナ属 , Thale cress , シロイヌナズナ Thale cress , シロイヌナズナ

Annotation Details

ID
Group/Domain
Name
Link
Source Annotation(1 item)
 
Zinc finger protein GIS3
OrthoDB(1 item)
221796at33090
Zinc finger C2H2 superfamily
InterPro(2 items)
 
Zinc finger C2H2-type
Gene ontology(11 items)
MF
transcription regulatory region sequence-specific DNA binding
BP
cytokinin-activated signaling pathway
BP
trichome differentiation
MF
metal ion binding
MF
DNA-binding transcription factor activity
BP
multicellular organism development
BP
regulation of transcription, DNA-templated
BP
gibberellic acid mediated signaling pathway
BP
trichome morphogenesis
BP
glucosinolate metabolic process
GO slim(14 items)
BP
response to stimulus
BP
regulation of biological process
BP
developmental process
BP
cell communication
MF
nucleic acid binding
BP
regulation of molecular function
BP
transcription, DNA-templated
BP
organic acid metabolic process
BP
sulfur compound metabolic process
BP
secondary metabolic process
BP
multicellular organismal process
BP
nitrogen compound metabolic process

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.