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Arabidopsis thaliana

Assembly Name:TAIR10

Gene File:Araport11_genes.201606.pep.fasta.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
AT1G67560.1
PEP
AT1G67560.1
Position on the Genome Chromosome Chr1
Start Position 25319926
End Position 25324117
Strand +
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI00141775
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
Lipoxygenase
Gene ID
Ortholog group unique ID
Functional annotation Source DB
trembl
Protein name
PLAT domain-containing protein
Accession
CrossRef Refseq from UniProt
NA
EC
NA
KEGG entry
NA
KO ID
NA
Pfam ID
PF00305
Pfam Description Details
InterPro ID
IPR001024,IPR001246,IPR036392,IPR036226,IPR000907,IPR027433,IPR042057,IPR013819
InterPro Description Details
GO ID
GO:0046872,GO:0016702,GO:0031408
GO Description Details
GOslim ID
GO:0043167,GO:0044255,GO:0006082,GO:0051213
GO slim Description Details
Transcription Factor (TF) family 
NA
TF family Description
NA
Best hit taxonomy Species Arabidopsis thaliana
Family Brassicaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments
gene , 遺伝子 , ecotype Col-0 , Brassicaceae , アブラナ科 , Arabidopsis , シロイヌナズナ属 , Thale cress , シロイヌナズナ Thale cress , シロイヌナズナ

Annotation Details

ID
Group/Domain
Name
Link
Source Annotation(1 item)
 
PLAT domain-containing protein
OrthoDB(1 item)
13512at33090
Lipoxygenase
Pfam(1 item)
 
Lipoxygenase
InterPro(8 items)
 
PLAT/LH2 domain
 
LipOase_plant
 
PLAT/LH2_dom_sf
 
Lipoxygenase_dom_3
 
Lipoxy_PLAT/LH2
 
Lipoxygenase, C-terminal
Gene ontology(3 items)
MF
metal ion binding
MF
oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen
BP
oxylipin biosynthetic process
GO slim(4 items)
BP
cellular lipid metabolic process
BP
organic acid metabolic process
MF
dioxygenase activity

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.