Plant GARDEN How To ▶︎

JA

EN

Arabidopsis thaliana

Assembly Name:TAIR10

Gene File:Araport11_genes.201606.pep.fasta.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
AT1G66170.1
PEP
AT1G66170.1
Position on the Genome Chromosome Chr1
Start Position 24638793
End Position 24641222
Strand -
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI00190123
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
Zinc finger, PHD-type
Gene ID
Ortholog group unique ID
Functional annotation Source DB
swissprot
Protein name
PHD finger protein MALE MEIOCYTE DEATH 1
Accession
CrossRef Refseq from UniProt
EC
NA
KEGG entry
NA
KO ID
NA
Pfam ID
PF00628
Pfam Description Details
InterPro ID
IPR011011,IPR019787,IPR019786,IPR013083,IPR001965
InterPro Description Details
GO ID
GO:0033613,GO:0042393,GO:0048235,GO:0010032,GO:0005634,GO:0051321,GO:0005719,GO:0000212,GO:0006355,GO:0046872,GO:0003677,GO:0007060,GO:1990188,GO:0043565
GO Description Details
GOslim ID
GO:0032501,GO:0007059,GO:0006351,GO:0007049,GO:0000280,GO:0005515,GO:0032502,GO:0000003,GO:0051704,GO:0003676,GO:0005634,GO:0005694,GO:0003682,GO:0006323,GO:0050789,GO:0043167
GO slim Description Details
Transcription Factor (TF) family 
NA
TF family Description
NA
Best hit taxonomy Species Arabidopsis thaliana
Family Brassicaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments
gene , 遺伝子 , ecotype Col-0 , Brassicaceae , アブラナ科 , Arabidopsis , シロイヌナズナ属 , Thale cress , シロイヌナズナ Thale cress , シロイヌナズナ

Annotation Details

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.