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Arabidopsis thaliana

Assembly Name:TAIR10

Gene File:Araport11_genes.201606.pep.fasta.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
AT1G65840.1
PEP
AT1G65840.1
Position on the Genome Chromosome Chr1
Start Position 24490173
End Position 24492728
Strand +
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI00416463
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
Amine oxidase
Gene ID
Ortholog group unique ID
Functional annotation Source DB
swissprot
Protein name
Probable polyamine oxidase 4
Accession
CrossRef Refseq from UniProt
EC
KEGG entry
KO ID
NA
Pfam ID
PF01593
Pfam Description Details
InterPro ID
IPR036188,IPR001613,IPR002937
InterPro Description Details
GO ID
GO:0046592,GO:0052901,GO:0016491,GO:0046203,GO:0005777,GO:0006598,GO:0052894,GO:0052895,GO:0046208
GO Description Details
GOslim ID
GO:0016491,GO:0009308,GO:0042579
GO slim Description Details
Transcription Factor (TF) family 
NA
TF family Description
NA
Best hit taxonomy Species Arabidopsis thaliana
Family Brassicaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments ath:AT1G65840
gene , 遺伝子 , ecotype Col-0 , Brassicaceae , アブラナ科 , Arabidopsis , シロイヌナズナ属 , Thale cress , シロイヌナズナ Thale cress , シロイヌナズナ

Annotation Details

ID
Group/Domain
Name
Link
Source Annotation(2 items)
 
Probable polyamine oxidase 4
OrthoDB(1 item)
182641at33090
Amine oxidase
Pfam(1 item)
 
Flavin containing amine oxidoreductase
InterPro(3 items)
 
FAD/NAD-bd_sf
 
Flavin_amine_oxidase
 
Amine oxidase
Gene ontology(9 items)
MF
polyamine oxidase activity
MF
spermine:oxygen oxidoreductase (spermidine-forming) activity
MF
oxidoreductase activity
BP
spermidine catabolic process
BP
polyamine catabolic process
MF
norspermine:oxygen oxidoreductase activity
MF
N1-acetylspermine:oxygen oxidoreductase (N1-acetylspermidine-forming) activity
BP
spermine catabolic process
GO slim(3 items)
MF
oxidoreductase activity
BP
amine metabolic process

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.