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Arabidopsis thaliana

Assembly Name:TAIR10

Gene File:Araport11_genes.201606.pep.fasta.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
AT1G61660.1
PEP
AT1G61660.1
Position on the Genome Chromosome Chr1
Start Position 22754003
End Position 22756171
Strand -
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI00098144
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
Myc-type, basic helix-loop-helix (bHLH) domain
Gene ID
Ortholog group unique ID
Functional annotation Source DB
swissprot
Protein name
Transcription factor bHLH112
Accession
CrossRef Refseq from UniProt
EC
NA
KEGG entry
NA
KO ID
NA
Pfam ID
NA
Pfam Description
InterPro ID
IPR011598,IPR036638
InterPro Description Details
GO ID
GO:0005634,GO:0003700,GO:2000214,GO:0001228,GO:0000978,GO:0045893,GO:0043565,GO:0071472,GO:2000377,GO:0046983,GO:0071215,GO:0042631
GO Description Details
GOslim ID
GO:0005634,GO:0050896,GO:0009308,GO:0003676,GO:0006351,GO:0065009,GO:0005694,GO:0050789,GO:0046483,GO:0005515,GO:0042180,GO:0007154,GO:0006520,GO:0008152
GO slim Description Details
Transcription Factor (TF) family 
TF family Description
bHLH family protein
Best hit taxonomy Species Arabidopsis thaliana
Family Brassicaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments
gene , 遺伝子 , ecotype Col-0 , Brassicaceae , アブラナ科 , Arabidopsis , シロイヌナズナ属 , Thale cress , シロイヌナズナ Thale cress , シロイヌナズナ

Annotation Details

ID
Group/Domain
Name
Link
Source Annotation(1 item)
 
Transcription factor bHLH112
OrthoDB(1 item)
117073at33090
Myc-type, basic helix-loop-helix (bHLH) domain
InterPro(2 items)
 
Myc-type, basic helix-loop-helix (bHLH) domain
 
HLH_DNA-bd_sf
Gene ontology(12 items)
MF
DNA-binding transcription factor activity
BP
regulation of proline metabolic process
MF
DNA-binding transcription activator activity, RNA polymerase II-specific
MF
RNA polymerase II cis-regulatory region sequence-specific DNA binding
BP
positive regulation of transcription, DNA-templated
MF
sequence-specific DNA binding
BP
cellular response to salt stress
BP
regulation of reactive oxygen species metabolic process
MF
protein dimerization activity
BP
cellular response to abscisic acid stimulus
BP
cellular response to water deprivation
GO slim(14 items)
BP
response to stimulus
BP
amine metabolic process
MF
nucleic acid binding
BP
transcription, DNA-templated
BP
regulation of molecular function
BP
regulation of biological process
BP
heterocycle metabolic process
MF
protein binding
BP
cellular ketone metabolic process
BP
cell communication
BP
cellular amino acid metabolic process
BP
metabolic process

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.