Plant GARDEN How To ▶︎

JA

EN

Arabidopsis thaliana

Assembly Name:TAIR10

Gene File:Araport11_genes.201606.pep.fasta.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
AT1G61360.1
PEP
AT1G61360.1
Position on the Genome Chromosome Chr1
Start Position 22637867
End Position 22640974
Strand -
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI00360429
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
Protein kinase domain
Gene ID
Ortholog group unique ID
Functional annotation Source DB
trembl
Protein name
Receptor-like serine/threonine-protein kinase
Accession
CrossRef Refseq from UniProt
NA
EC
KEGG entry
NA
KO ID
NA
Pfam ID
PF08276,PF01453,PF07714,PF00954
Pfam Description Details
InterPro ID
IPR001480,IPR000858,IPR011009,IPR000719,IPR001245,IPR036426,IPR024171,IPR003609
InterPro Description Details
GO ID
GO:0030246,GO:0016021,GO:0005524,GO:0048544,GO:0004674
GO Description Details
GOslim ID
GO:0043167,GO:0016740,GO:0032501,GO:0008037,GO:0051704,GO:0016020,GO:0006793,GO:0006464,GO:0007154,GO:0000166,GO:0000003,GO:0030246
GO slim Description Details
Transcription Factor (TF) family 
NA
TF family Description
NA
Best hit taxonomy Species Arabidopsis thaliana
Family Brassicaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments
gene , 遺伝子 , ecotype Col-0 , Brassicaceae , アブラナ科 , Arabidopsis , シロイヌナズナ属 , Thale cress , シロイヌナズナ Thale cress , シロイヌナズナ

Annotation Details

ID
Group/Domain
Name
Link
Source Annotation(2 items)
 
Receptor-like serine/threonine-protein kinase
OrthoDB(1 item)
12926at33090
Protein kinase domain
Pfam(4 items)
 
PAN-like domain
 
D-mannose binding lectin
 
Protein tyrosine kinase
 
S-locus glycoprotein domain
InterPro(8 items)
 
Bulb-type lectin domain
 
S-locus glycoprotein domain
 
Kinase-like_dom_sf
 
Protein kinase domain
 
Serine-threonine/tyrosine-protein kinase, catalytic domain
 
Bulb-type_lectin_dom_sf
 
SRK-like_kinase
 
PAN/Apple domain
Gene ontology(5 items)
MF
carbohydrate binding
CC
integral component of membrane
BP
recognition of pollen
MF
protein serine/threonine kinase activity
GO slim(12 items)
MF
transferase activity
BP
multicellular organismal process
BP
cell recognition
BP
multi-organism process
BP
phosphorus metabolic process
BP
cellular protein modification process
BP
cell communication
MF
nucleotide binding
MF
carbohydrate binding

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.