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Arabidopsis thaliana

Assembly Name:TAIR10

Gene File:Araport11_genes.201606.pep.fasta.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
AT1G60095.1
PEP
AT1G60095.1
Position on the Genome Chromosome Chr1
Start Position 22159918
End Position 22162265
Strand +
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI00389828
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
Jacalin-like lectin domain
Gene ID
Ortholog group unique ID
Functional annotation Source DB
trembl
Protein name
Mannose-binding lectin superfamily protein
Accession
CrossRef Refseq from UniProt
EC
NA
KEGG entry
NA
KO ID
NA
Pfam ID
PF01419
Pfam Description Details
InterPro ID
IPR033734,IPR001229,IPR036404
InterPro Description Details
GO ID
GO:0030246
GO Description Details
GOslim ID
GO:0030246
GO slim Description Details
Transcription Factor (TF) family 
NA
TF family Description
NA
Best hit taxonomy Species Arabidopsis thaliana
Family Brassicaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments
gene , 遺伝子 , ecotype Col-0 , Brassicaceae , アブラナ科 , Arabidopsis , シロイヌナズナ属 , Thale cress , シロイヌナズナ Thale cress , シロイヌナズナ

Annotation Details

ID
Group/Domain
Name
Link
Source Annotation(1 item)
 
Mannose-binding lectin superfamily protein
OrthoDB(1 item)
111366at33090
Jacalin-like lectin domain
Pfam(1 item)
 
Jacalin-like lectin domain
InterPro(3 items)
 
Jacalin-like_lectin_dom_plant
 
Jacalin-like lectin domain
 
Jacalin-like_lectin_dom_sf
Gene ontology(1 item)
MF
carbohydrate binding
GO slim(1 item)
MF
carbohydrate binding

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.