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Arabidopsis thaliana

Assembly Name:TAIR10

Gene File:Araport11_genes.201606.pep.fasta.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
AT1G59820.1
PEP
AT1G59820.1
Position on the Genome Chromosome Chr1
Start Position 22011599
End Position 22020023
Strand +
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI00586381
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
P-type ATPase
Gene ID
Ortholog group unique ID
Functional annotation Source DB
swissprot
Protein name
Phospholipid-transporting ATPase 3
Accession
CrossRef Refseq from UniProt
EC
KEGG entry
KO ID
NA
Pfam ID
PF16209,PF16212
Pfam Description Details
InterPro ID
IPR023214,IPR023298,IPR032631,IPR018303,IPR036412,IPR023299,IPR032630,IPR001757,IPR008250,IPR006539
InterPro Description Details
GO ID
GO:0048194,GO:0006893,GO:0015031,GO:0048367,GO:0048364,GO:1901703,GO:0002238,GO:0002237,GO:0005524,GO:0005768,GO:0015247,GO:0005789,GO:0050832,GO:0005794,GO:0045332,GO:0005802,GO:0005886,GO:0000139,GO:0016021,GO:0000287,GO:0042742,GO:0005634,GO:0005783,GO:0008104,GO:0140326
GO Description Details
GOslim ID
GO:0043167,GO:0005768,GO:0016787,GO:0051179,GO:0065008,GO:0005634,GO:0000166,GO:0005783,GO:0016050,GO:0006811,GO:0032501,GO:0016020,GO:0061024,GO:0032502,GO:0005215,GO:0009914,GO:0050896,GO:0015031,GO:0006869,GO:0044419,GO:0005794,GO:0016192
GO slim Description Details
Transcription Factor (TF) family 
NA
TF family Description
NA
Best hit taxonomy Species Arabidopsis thaliana
Family Brassicaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments ath:AT1G59820
gene , 遺伝子 , ecotype Col-0 , Brassicaceae , アブラナ科 , Arabidopsis , シロイヌナズナ属 , Thale cress , シロイヌナズナ Thale cress , シロイヌナズナ

Annotation Details

ID
Group/Domain
Name
Link
Source Annotation(2 items)
 
Phospholipid-transporting ATPase 3
OrthoDB(1 item)
3759at33090
P-type ATPase
Pfam(2 items)
 
Phospholipid-translocating ATPase N-terminal
 
Phospholipid-translocating P-type ATPase C-terminal
InterPro(10 items)
 
ATPase_P-typ_TM_dom_sf
 
P-type ATPase, N-terminal
 
ATPase_P-typ_P_site
 
ATPase_P-typ_cyto_dom_N
 
P-type ATPase, C-terminal
 
ATPase_P-typ_transduc_dom_A_sf
 
P-type_ATPase_IV
Gene ontology(25 items)
BP
Golgi vesicle budding
BP
Golgi to plasma membrane transport
BP
protein transport
BP
shoot system development
BP
root development
BP
protein localization involved in auxin polar transport
BP
response to molecule of fungal origin
BP
response to molecule of bacterial origin
MF
aminophospholipid flippase activity
CC
endoplasmic reticulum membrane
BP
defense response to fungus
CC
Golgi apparatus
BP
phospholipid translocation
CC
trans-Golgi network
CC
plasma membrane
CC
Golgi membrane
CC
integral component of membrane
MF
magnesium ion binding
BP
defense response to bacterium
CC
endoplasmic reticulum
BP
protein localization
MF
ATPase-coupled intramembrane lipid transporter activity
GO slim(22 items)
MF
hydrolase activity
BP
regulation of biological quality
MF
nucleotide binding
CC
endoplasmic reticulum
BP
vesicle organization
BP
ion transport
BP
multicellular organismal process
BP
membrane organization
BP
developmental process
MF
transporter activity
BP
hormone transport
BP
response to stimulus
BP
protein transport
BP
lipid transport
BP
interspecies interaction between organisms
CC
Golgi apparatus
BP
vesicle-mediated transport

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.