Arabidopsis thalianaAssembly Name:TAIR10
Gene File:Araport11_genes.201606.pep.fasta.gz
| Position on the Genome | Gene Name | CDS | AT1G55860.1 |
| PEP | AT1G55860.1 |
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| Position on the Genome | Chromosome | Chr1 | |
| Start Position | 20879900 | ||
| End Position | 20892910 | ||
| Strand | - | ||
| Annotation (Hayai Annotation ZEN) |
KusakiDB | KusakiDB Accession | KUNI00164762 |
|---|---|---|---|
| KusakiDB version | 2 | ||
| Evidence is present | Yes | ||
| Databases intersection (the sequence exists in multiple databases) | orthodb-refseq-uniprot |
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| OrthoDB | Database version | 10.1 | |
| Description | E3 ubiquitin ligase, domain of unknown function DUF908 |
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| Gene ID | |||
| Ortholog group unique ID | |||
| Functional annotation | Source DB | swissprot |
|
| Protein name | E3 ubiquitin-protein ligase UPL1 |
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| Accession | |||
| CrossRef Refseq from UniProt | |||
| EC | |||
| KEGG entry | NA |
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| KO ID | NA |
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| Pfam ID | PF00632,PF00627,PF06025,PF06012,PF14377 |
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| Pfam Description | Details | ||
| InterPro ID | IPR010314,IPR010309,IPR035983,IPR016024,IPR015940,IPR025527,IPR009060,IPR003903,IPR000569 |
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| InterPro Description | Details | ||
| GO ID | GO:0000151,GO:0004842,GO:0006511,GO:0045732,GO:0005739,GO:0000209,GO:0061630,GO:0043161,GO:0005829,GO:0005634,GO:0016567,GO:0005737,GO:0009506 |
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| GO Description | Details | ||
| GOslim ID | GO:0005739,GO:0009057,GO:0005737,GO:0006464,GO:0006508,GO:0050789,GO:0000151,GO:0019538,GO:0019787,GO:0005634,GO:0055044 |
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| GO slim Description | Details | ||
| Transcription Factor (TF) family | NA |
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| TF family Description | NA |
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| Best hit taxonomy | Species | Arabidopsis thaliana | |
| Family | Brassicaceae | ||
| Phylum | Streptophyta | ||
| Superkingdom | Eukaryota | ||
| Comments | |||
