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Arabidopsis thaliana

Assembly Name:TAIR10

Gene File:Araport11_genes.201606.pep.fasta.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
AT1G55740.1
PEP
AT1G55740.1
Position on the Genome Chromosome Chr1
Start Position 20835507
End Position 20838707
Strand -
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI02079216
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
Glycosyl hydrolases 36
Gene ID
Ortholog group unique ID
Functional annotation Source DB
trembl
Protein name
Galactinol--sucrose galactosyltransferase
Accession
CrossRef Refseq from UniProt
NA
EC
KEGG entry
NA
KO ID
NA
Pfam ID
PF05691
Pfam Description Details
InterPro ID
IPR013785,IPR008811,IPR017853
InterPro Description Details
GO ID
GO:0047274,GO:0005975
GO Description Details
GOslim ID
GO:0016740,GO:0005975
GO slim Description Details
Transcription Factor (TF) family 
NA
TF family Description
NA
Best hit taxonomy Species Arabidopsis thaliana
Family Brassicaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments
gene , 遺伝子 , ecotype Col-0 , Brassicaceae , アブラナ科 , Arabidopsis , シロイヌナズナ属 , Thale cress , シロイヌナズナ Thale cress , シロイヌナズナ

Annotation Details

ID
Group/Domain
Name
Link
Source Annotation(2 items)
 
Galactinol--sucrose galactosyltransferase
OrthoDB(1 item)
97350at33090
Glycosyl hydrolases 36
Pfam(1 item)
 
Raffinose synthase or seed imbibition protein Sip1
InterPro(3 items)
 
Glycosyl hydrolases 36
 
Glycoside_hydrolase_SF
Gene ontology(2 items)
MF
galactinol-sucrose galactosyltransferase activity
BP
carbohydrate metabolic process
GO slim(2 items)
MF
transferase activity
BP
carbohydrate metabolic process

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.