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Arabidopsis thaliana

Assembly Name:TAIR10

Gene File:Araport11_genes.201606.pep.fasta.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
AT1G55300.2
PEP
AT1G55300.2
Position on the Genome Chromosome Chr1
Start Position 20628154
End Position 20629490
Strand -
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI01630855
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
Transcription initiation factor TFIID subunit 7
Gene ID
Ortholog group unique ID
Functional annotation Source DB
swissprot
Protein name
Transcription initiation factor TFIID subunit 7
Accession
CrossRef Refseq from UniProt
EC
NA
KEGG entry
KO ID
NA
Pfam ID
PF04658
Pfam Description Details
InterPro ID
IPR037817,IPR006751
InterPro Description Details
GO ID
GO:0005669,GO:0051123
GO Description Details
GOslim ID
GO:0065003,GO:0005667,GO:0016591,GO:0006351
GO slim Description Details
Transcription Factor (TF) family 
NA
TF family Description
NA
Best hit taxonomy Species Arabidopsis thaliana
Family Brassicaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments ath:AT1G55300
gene , 遺伝子 , ecotype Col-0 , Brassicaceae , アブラナ科 , Arabidopsis , シロイヌナズナ属 , Thale cress , シロイヌナズナ Thale cress , シロイヌナズナ

Annotation Details

ID
Group/Domain
Name
Link
Source Annotation(1 item)
 
Transcription initiation factor TFIID subunit 7
OrthoDB(1 item)
219440at33090
Transcription initiation factor TFIID subunit 7
Pfam(1 item)
 
TAFII55 protein conserved region
InterPro(2 items)
 
TAFII55 protein, conserved region
Gene ontology(2 items)
CC
transcription factor TFIID complex
BP
RNA polymerase II preinitiation complex assembly
GO slim(4 items)
BP
protein-containing complex assembly
CC
transcription regulator complex
CC
RNA polymerase II, holoenzyme
BP
transcription, DNA-templated

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.