Plant GARDEN How To ▶︎

JA

EN

Arabidopsis thaliana

Assembly Name:TAIR10

Gene File:Araport11_genes.201606.pep.fasta.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
AT1G54500.1
PEP
AT1G54500.1
Position on the Genome Chromosome Chr1
Start Position 20357084
End Position 20357671
Strand -
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI00596344
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
Rubredoxin domain
Gene ID
Ortholog group unique ID
Functional annotation Source DB
trembl
Protein name
At1g54500/F20D21_31
Accession
CrossRef Refseq from UniProt
EC
NA
KEGG entry
NA
KO ID
NA
Pfam ID
PF00301
Pfam Description Details
InterPro ID
IPR018527,IPR024935,IPR024934
InterPro Description Details
GO ID
GO:0005506,GO:0009535,GO:0009055,GO:0005634,GO:0010207,GO:0043448,GO:0016021,GO:0009507
GO Description Details
GOslim ID
GO:0043446,GO:0005634,GO:0015979,GO:0009536,GO:0006091,GO:0016020,GO:0009579,GO:0009055,GO:0065003,GO:0043167
GO slim Description Details
Transcription Factor (TF) family 
NA
TF family Description
NA
Best hit taxonomy Species Arabidopsis thaliana
Family Brassicaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments
gene , 遺伝子 , ecotype Col-0 , Brassicaceae , アブラナ科 , Arabidopsis , シロイヌナズナ属 , Thale cress , シロイヌナズナ Thale cress , シロイヌナズナ

Annotation Details

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.