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Arabidopsis thaliana

Assembly Name:TAIR10

Gene File:Araport11_genes.201606.pep.fasta.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
AT1G54350.1
PEP
AT1G54350.1
Position on the Genome Chromosome Chr1
Start Position 20286917
End Position 20290245
Strand +
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI00656138
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
ABC transporter type 1, transmembrane domain
Gene ID
Ortholog group unique ID
Functional annotation Source DB
swissprot
Protein name
ABC transporter D family member 2, chloroplastic
Accession
CrossRef Refseq from UniProt
EC
KEGG entry
NA
KO ID
NA
Pfam ID
PF00005,PF06472
Pfam Description Details
InterPro ID
IPR011527,IPR003439,IPR003593,IPR036640,IPR017871,IPR027417
InterPro Description Details
GO ID
GO:0007031,GO:0005778,GO:0005524,GO:0009507,GO:0042626,GO:0042760,GO:0015910,GO:0016887,GO:0005324,GO:0016021,GO:0006635
GO Description Details
GOslim ID
GO:0051641,GO:0005215,GO:0015849,GO:0044255,GO:0016020,GO:0006082,GO:0000166,GO:0005575,GO:0009536,GO:0016787,GO:0042579,GO:0043167,GO:0055114,GO:0007031,GO:0006811,GO:0006869,GO:0006810
GO slim Description Details
Transcription Factor (TF) family 
NA
TF family Description
NA
Best hit taxonomy Species Arabidopsis thaliana
Family Brassicaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments
gene , 遺伝子 , ecotype Col-0 , Brassicaceae , アブラナ科 , Arabidopsis , シロイヌナズナ属 , Thale cress , シロイヌナズナ Thale cress , シロイヌナズナ

Annotation Details

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.