Plant GARDEN How To ▶︎

JA

EN

Arabidopsis thaliana

Assembly Name:TAIR10

Gene File:Araport11_genes.201606.pep.fasta.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
AT1G54280.3
PEP
AT1G54280.3
Position on the Genome Chromosome Chr1
Start Position 20262766
End Position 20267293
Strand -
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI00164173
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
P-type ATPase
Gene ID
Ortholog group unique ID
Functional annotation Source DB
swissprot
Protein name
Phospholipid-transporting ATPase 6
Accession
CrossRef Refseq from UniProt
EC
KEGG entry
KO ID
NA
Pfam ID
PF16212,PF16209
Pfam Description Details
InterPro ID
IPR032631,IPR001757,IPR008250,IPR023298,IPR036412,IPR023214,IPR023299,IPR006539,IPR018303,IPR032630
InterPro Description Details
GO ID
GO:0008270,GO:0045332,GO:0016021,GO:0009860,GO:0140326,GO:1905038,GO:0010286,GO:0000287,GO:0005524,GO:0012505,GO:0005886
GO Description Details
GOslim ID
GO:0043167,GO:0061024,GO:0005773,GO:0065008,GO:0006869,GO:0016020,GO:0044255,GO:0000003,GO:0050789,GO:0006811,GO:0032502,GO:0016787,GO:0032501,GO:0000166,GO:0050896,GO:0005215,GO:0016049,GO:0051704
GO slim Description Details
Transcription Factor (TF) family 
NA
TF family Description
NA
Best hit taxonomy Species Arabidopsis thaliana
Family Brassicaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments ath:AT1G54280
gene , 遺伝子 , ecotype Col-0 , Brassicaceae , アブラナ科 , Arabidopsis , シロイヌナズナ属 , Thale cress , シロイヌナズナ Thale cress , シロイヌナズナ

Annotation Details

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.