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Arabidopsis thaliana

Assembly Name:TAIR10

Gene File:Araport11_genes.201606.pep.fasta.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
AT1G52200.1
PEP
AT1G52200.1
Position on the Genome Chromosome Chr1
Start Position 19442271
End Position 19443407
Strand -
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI00440431
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
PLAC8 motif-containing protein
Gene ID
Ortholog group unique ID
Functional annotation Source DB
swissprot
Protein name
Protein PLANT CADMIUM RESISTANCE 8
Accession
CrossRef Refseq from UniProt
EC
NA
KEGG entry
NA
KO ID
NA
Pfam ID
PF04749
Pfam Description Details
InterPro ID
IPR006461
InterPro Description Details
GO ID
GO:0016021,GO:0006979,GO:0005886
GO Description Details
GOslim ID
GO:0050896,GO:0016020
GO slim Description Details
Transcription Factor (TF) family 
NA
TF family Description
NA
Best hit taxonomy Species Arabidopsis thaliana
Family Brassicaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments
gene , 遺伝子 , ecotype Col-0 , Brassicaceae , アブラナ科 , Arabidopsis , シロイヌナズナ属 , Thale cress , シロイヌナズナ Thale cress , シロイヌナズナ

Annotation Details

ID
Group/Domain
Name
Link
Source Annotation(1 item)
 
Protein PLANT CADMIUM RESISTANCE 8
OrthoDB(1 item)
188757at33090
PLAC8 motif-containing protein
Pfam(1 item)
 
PLAC8 family
InterPro(1 item)
 
PLAC8 motif-containing protein
Gene ontology(3 items)
CC
integral component of membrane
BP
response to oxidative stress
CC
plasma membrane
GO slim(2 items)
BP
response to stimulus

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.