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Arabidopsis thaliana

Assembly Name:TAIR10

Gene File:Araport11_genes.201606.pep.fasta.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
AT1G51140.1
PEP
AT1G51140.1
Position on the Genome Chromosome Chr1
Start Position 18943802
End Position 18945613
Strand -
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI00293945
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
Myc-type, basic helix-loop-helix (bHLH) domain
Gene ID
Ortholog group unique ID
Functional annotation Source DB
swissprot
Protein name
Transcription factor bHLH122
Accession
CrossRef Refseq from UniProt
EC
NA
KEGG entry
NA
KO ID
NA
Pfam ID
PF00010
Pfam Description Details
InterPro ID
IPR036638,IPR011598
InterPro Description Details
GO ID
GO:0046983,GO:0010119,GO:0000976,GO:0006355,GO:0003700,GO:0005634,GO:0001228,GO:0048573,GO:0042335
GO Description Details
GOslim ID
GO:0065009,GO:0010118,GO:0005515,GO:0000003,GO:0050789,GO:0032501,GO:0050896,GO:0006351,GO:0003676,GO:0005634,GO:0032502,GO:0005694
GO slim Description Details
Transcription Factor (TF) family 
TF family Description
bHLH family protein
Best hit taxonomy Species Arabidopsis thaliana
Family Brassicaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments
gene , 遺伝子 , ecotype Col-0 , Brassicaceae , アブラナ科 , Arabidopsis , シロイヌナズナ属 , Thale cress , シロイヌナズナ Thale cress , シロイヌナズナ

Annotation Details

ID
Group/Domain
Name
Link
Source Annotation(1 item)
 
Transcription factor bHLH122
OrthoDB(1 item)
184748at33090
Myc-type, basic helix-loop-helix (bHLH) domain
Pfam(1 item)
 
Helix-loop-helix DNA-binding domain
InterPro(2 items)
 
HLH_DNA-bd_sf
 
Myc-type, basic helix-loop-helix (bHLH) domain
Gene ontology(9 items)
MF
protein dimerization activity
BP
regulation of stomatal movement
MF
transcription regulatory region sequence-specific DNA binding
BP
regulation of transcription, DNA-templated
MF
DNA-binding transcription factor activity
MF
DNA-binding transcription activator activity, RNA polymerase II-specific
BP
photoperiodism, flowering
BP
cuticle development
GO slim(12 items)
BP
regulation of molecular function
BP
stomatal movement
MF
protein binding
BP
regulation of biological process
BP
multicellular organismal process
BP
response to stimulus
BP
transcription, DNA-templated
MF
nucleic acid binding
BP
developmental process

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.