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Arabidopsis thaliana

Assembly Name:TAIR10

Gene File:Araport11_genes.201606.pep.fasta.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
AT1G48090.2
PEP
AT1G48090.2
Position on the Genome Chromosome Chr1
Start Position 17732582
End Position 17758194
Strand -
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI00216905
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
Vacuolar protein sorting-associated protein 13, N-terminal domain
Gene ID
Ortholog group unique ID
Functional annotation Source DB
trembl
Protein name
Calcium-dependent lipid-binding family protein
Accession
CrossRef Refseq from UniProt
EC
NA
KEGG entry
KO ID
NA
Pfam ID
PF00168,PF16910,PF12624,PF06101,PF16908,PF06650
Pfam Description Details
InterPro ID
IPR031642,IPR026854,IPR000008,IPR009543,IPR031646,IPR009291,IPR026847,IPR035892
InterPro Description Details
GO ID
GO:0045053,GO:0019898,GO:0006623
GO Description Details
GOslim ID
GO:0015031,GO:0016020,GO:0051641,GO:0065008,GO:0005575
GO slim Description Details
Transcription Factor (TF) family 
NA
TF family Description
NA
Best hit taxonomy Species Arabidopsis thaliana
Family Brassicaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments ath:AT1G48090
gene , 遺伝子 , ecotype Col-0 , Brassicaceae , アブラナ科 , Arabidopsis , シロイヌナズナ属 , Thale cress , シロイヌナズナ Thale cress , シロイヌナズナ

Annotation Details

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.